Vol.89, No.2, 2020, pp.375-384, doi:10.32604/phyton.2020.08831
OPEN ACCESS
ARTICLE
The Chloroplast Genome of Cerasus Campanulata Diverges from Other Prunoideae Genomes
  • Yuhao Weng1, Liming Zhu2, Yan Ma3, Hao Su1, Lu Lu1, Pengkai Wang1, Jinhui Chen1, Asif Ali1, Renhua Zheng4,*, Jisen Shi1,*
1 Key Laboratory of Forest Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, 210037, China
2 College of Biology and the Environment, Nanjing Forestry University, China Forestry University, Nanjing, 210037, China
3 Jinling Institute of Technology, Nanjing, 210037, China
4 Fujian Academy of Forestry, Fuzhou, 350012, China
* Corresponding Authors: Renhua Zheng. Email: zrh08@126.com; Jisen Shi. Email: jshi@njfu.edu.cn
Received 15 October 2019; Accepted 07 January 2020; Issue published 22 April 2020
Abstract
Cerasus Campanulata is one of several species belonging to the Prunoideae focke, a subfamily of the flowering plant Rosaceae. We investigated the details of its chloroplast genome which may reveal its genus independent of morphological determination. Here, we determined the complete chloroplast (cp) genome sequence of C. campanulata and performed sequence analysis to reveal the presence of 18 forward repeats, 20 palindrome repeats, 2 complement repeats, 4 reverse repeats and 93 simple sequence repeats (SSRs). We additionally performed a comparative study of C. campanulata and seven other Prunoideae focke species. Then, maximum parsimony (MP) and maximum likelihood (ML) phylogenetic analyses were carried out in the little part of Rosaceae, respectively. The results strongly support a position of C. campanulata as a member of the Cerasus in the Rosaceae family. Moreover, the complete cp genome can be used for plant phylogenetic and evolutionary studies that will provide insight into the degree of gene conservation.
Keywords
Cerasus campanulata; chloroplast genome sequence; repeat and SSR; phylogenetic analysis
Cite This Article
Weng, Y., Zhu, L., Ma, Y., Su, H., Lu, L. et al. (2020). The Chloroplast Genome of Cerasus Campanulata Diverges from Other Prunoideae Genomes. Phyton-International Journal of Experimental Botany, 89(2), 375–384.