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  • Open Access

    ARTICLE

    Two-stage classifiers that minimize PCA3 and the PSA proteolytic activity testing in the prediction of prostate cancer recurrence after radical prostatectomy

    Daniel R. Jeske1,2, Jenifer A. Linehan3,4, Timothy G. Wilson3,4, Mark H. Kawachi3, Kristina Wittig3, Katarzya Lamparska3, Camille Amparo3, Rosa Mejia3, Fang Lai5, Dimitra Georganopoulou5, Steven S. Smith3

    Canadian Journal of Urology, Vol.24, No.6, pp. 9089-9097, 2017

    Abstract Introduction: Early biochemical recurrence after prostate cancer surgery is associated with higher risk of aggressive disease and cancer specific death. Many new tests are being developed that will predict the presence of indicators of aggressive disease like early biochemical recurrence. Since recurrence occurs in less than 10% of patients treated for prostate cancer, validation of such tests will require expensive testing on large patient groups. Moreover, clinical application of the validated test requires that each new patient be tested. In this report we introduce a two-stage classifier system that minimizes the number of patients that must… More >

  • Open Access

    ARTICLE

    Biochemical and molecular evidences of the presence of a plant natriuretic peptide in garlic (Allium sativum L.)

    Valle-Rodríguez CM1, S Valdés-Rodríguez2, NL Vasco-Méndez1, C Garcidueñas-Piña1, RE Soria-Guerra3, JF Morales-Domínguez1

    Phyton-International Journal of Experimental Botany, Vol.86, pp. 143-150, 2017, DOI:10.32604/phyton.2017.86.143

    Abstract The natriuretic peptides (NP) are vertebrate hormones involved in the regulation of ion and water homeostasis in the cell. In plants, natriuretic peptides (PNP) have been identified by molecular and biochemical methods. It has been suggested that PNPs, have similar functions to the PN, since they mediate (1) ion transport through the cell, (2) the opening and closing of Na+ and K+ channels through the stimulation and synthesis of a second messenger such as cGMP, and (3) the aperture of stomata. In this study, a PNPs gene was partially identified by PCR in garlic (Allium sativum L.),… More >

  • Open Access

    ARTICLE

    Wereke root (Ibervillea sonorae Greene) descriptive characteristics and biochemical generalities of its aqueous extract

    Sinagawa-García SR1, A Gutiérrez-Díez1, A Mora-Olivo2, MC Juárez-Aragón2, JA Torres-Castillo2

    Phyton-International Journal of Experimental Botany, Vol.84, No.2, pp. 358-367, 2015, DOI:10.32604/phyton.2015.84.358

    Abstract A general biochemical description of an aqueous extract obtained from Ibervillea sonorae root was reported; furthermore, a histological description for the root is included. A bromatological analysis was carried out, and it indicated that the study nutritional variables were similar to those reported in other edible tuberous roots including sweet potatoe, mandioca, bean yam and arracacha. For the first time, the presence of an active proteinase at alkaline pH and the inhibitory activity of trypsin were reported for this root. Several medical and bioactive properties have been attributed to the wereke root. Nevertheless, deeper studies are More >

  • Open Access

    ARTICLE

    Physiological and biochemical changes during organogenesis and somatic embryogenesis of HBsAg-transgenic cherry tomato mutant

    Guan Z-J1,3,4*, S-B Lu2*,Y-L Huo5, B Guo3, Z-P Guan6, Y-H Wei3

    Phyton-International Journal of Experimental Botany, Vol.84, No.2, pp. 351-357, 2015, DOI:10.32604/phyton.2015.84.351

    Abstract Leaf explants of the HBsAg-transgenic cherry tomato (Solanum lycopersicum) mutant were cultured on Murashige and Skoog (MS) basal medium, supplemented with 1.0 mg/L 6-BA and 0.05 mg/L IAA for callus induction, to clarify the physiological and biochemical characteristics of morphogenesis development. Therefore, the physiological and biochemical changes during the development of organogenic shoots and somatic embryos in the mutant were studied. Superoxide dismutase (SOD) activities of the mutant had only one peak value on the 21st day. Peroxidase (POD) activities of the mutant declined less sharply since the explants were cultured. IAA oxidase activity of… More >

  • Open Access

    ARTICLE

    Effects of Equiaxial Strain on the Differentiation of Dental Pulp Stem Cells without Using Biochemical Reagents

    F. S. Tabatabaei, M. Jazayeri, P. Ghahari, N. Haghighipour§

    Molecular & Cellular Biomechanics, Vol.11, No.3, pp. 209-220, 2014, DOI:10.3970/mcb.2014.011.209

    Abstract During orthodontic treatments, applied mechanical forces create strain and result in tooth movement through the alveolar bone. This response to mechanical strain is a fundamental biological reaction. The present study evaluated the effect of equiaxial strain within the range of orthodontic forces on the osteogenic differentiation of human dental pulp stem cells (hDPSCs). Following isolation and culture of hDPSCs, 3rd passage cells were transferred on a silicone membrane covered with collagen. Cell adhesion to the membrane was evaluated under scanning electron microscope (SEM). Cells were divided into three groups: the first group was placed in… More >

  • Open Access

    ARTICLE

    Mesoscopic Biochemical Basis of Isogenetic Inheritance and Canalization: Stochasticity, Nonlinearity, and Emergent Landscape

    Hong Qian, Hao Ge

    Molecular & Cellular Biomechanics, Vol.9, No.1, pp. 1-30, 2012, DOI:10.3970/mcb.2012.009.001

    Abstract Biochemical reaction systems in mesoscopic volume, under sustained environmental chemical gradient(s), can have multiple stochastic attractors. Two distinct mechanisms are known for their origins: (a) Stochastic single-molecule events, such as gene expression, with slow gene on-off dynamics; and (b) nonlinear networks with feedbacks. These two mechanisms yield different volume dependence for the sojourn time of an attractor. As in the classic Arrhenius theory for temperature dependent transition rates, a landscape perspective provides a natural framework for the system's behavior. However, due to the nonequilibrium nature of the open chemical systems, the landscape, and the attractors More >

  • Open Access

    ARTICLE

    Analysis of methodologies for the study of composition and biochemical carbohydrate changes in harvest and postharvest onion bulbs

    Abrameto MA, CM Pozzo Ardizzi, MI Gil, LM Molina

    Phyton-International Journal of Experimental Botany, Vol.79, pp. 123-132, 2010, DOI:10.32604/phyton.2010.79.123

    Abstract Costly investments in storage and transport of onion bulbs makes it increasingly important to identify cultivars with the best chance of long-term storage. This paper discusses our own and other researchers’ results and laboratory procedures on onion’s pungency, soluble solids, dry matter, respiration rate, carbohydrates and catabolism-related enzymes under different storage conditions. The variability in parameters such as carbohydrate composition, pungency, soluble solids and soluble uronic acid concentration in water is growth dependent, and defines the quality of onion bulbs at harvest time. During storage, these parameters can be modified by environmental conditions, presence of More >

  • Open Access

    ARTICLE

    Review : Biochemical-molecular markers in unilateral ureteral obstruction

    WALTER MANUCHA

    BIOCELL, Vol.31, No.1, pp. 1-12, 2007, DOI:10.32604/biocell.2007.31.001

    Abstract Congenital obstructive nephropathy is the primary cause of end-stage renal disease in children. Rapid diagnosis and initiation of the treatment are vital to preserve function and/or to slow down renal injury. Obstructive uropathy effects -decline in the plasmatic renal flow and glomerular filtration rate, interstitial infiltrate of leukocytes, significant decrease of the urine concentration, loss of the capacity to concentrate urine as well as fibrosis and apoptosis- are a consequence of a variety of factors that work in complex ways and are still not fully understood. Mediators as angiotensin II, transforming growth factor-β (TGF-β) and… More >

  • Open Access

    ABSTRACT

    Supplement. 6 Workshop: Biology of Ampullariidae Biochemical composition, tissue origin and functional properties of egg perivitellins from Pomacea canaliculata

    MARCOS S. DREON1, HORACIO HERAS1,2, RICARDO J. POLLERO1

    BIOCELL, Vol.30, Suppl.S, pp. 359-365, 2006

    Abstract This article has no abstract. More >

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