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  • Open Access

    ARTICLE

    JavaGenes: Evolving Molecular Force Field Parameters with Genetic Algorithm

    Al Globus1, Madhu Menon2, Deepak Srivastava1

    CMES-Computer Modeling in Engineering & Sciences, Vol.3, No.5, pp. 557-574, 2002, DOI:10.3970/cmes.2002.003.557

    Abstract A genetic algorithm procedure has been developed for fitting parameters for many-body interatomic force field functions. Given a physics or chemistry based analytic form for the force field function, parameters are typically chosen to fit a range of structural and physical properties given either by experiments and/or by higher accuracy tight-binding or ab-initio simulations. The method involves using both near equilibrium and far from equilibrium configurations in the fitting procedure, and is unlikely to be trapped in local minima in the complex many-dimensional parameter space. As a proof of concept, we demonstrate the procedure for… More >

  • Open Access

    ARTICLE

    An Inverse Boundary Element Method for Determining the Hydraulic Conductivity in Anisotropic Rocks

    R. Mustata1, S. D. Harris2, L. Elliott1, D. Lesnic1, D. B. Ingham1

    CMES-Computer Modeling in Engineering & Sciences, Vol.1, No.3, pp. 107-116, 2000, DOI:10.3970/cmes.2000.001.409

    Abstract An inverse boundary element method is developed to characterise the components of the hydraulic conductivity tensor K of anisotropic materials. Surface measurements at exposed boundaries serve as additional input to a Genetic Algorithm (GA) using a modified least squares functional that minimises the difference between observed and BEM-predicted boundary pressure and/or hydraulic flux measurements under current hydraulic conductivity tensor component estimates. More >

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