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  • Open Access

    ARTICLE

    Prediction of Intrinsically Disordered Proteins Based on Deep Neural Network-ResNet18

    Jie Zhang, Jiaxiang Zhao*, Pengchang Xu

    CMES-Computer Modeling in Engineering & Sciences, Vol.131, No.2, pp. 905-917, 2022, DOI:10.32604/cmes.2022.019097

    Abstract Accurately, reliably and rapidly identifying intrinsically disordered (IDPs) proteins is essential as they often play important roles in various human diseases; moreover, they are related to numerous important biological activities. However, current computational methods have yet to develop a network that is sufficiently deep to make predictions about IDPs and demonstrate an improvement in performance. During this study, we constructed a deep neural network that consisted of five identical variant models, ResNet18, combined with an MLP network, for classification. Resnet18 was applied for the first time as a deep model for predicting IDPs, which allowed the extraction of information from… More >

  • Open Access

    ARTICLE

    Estimating Weibull Parameters Using Least Squares and Multilayer Perceptron vs. Bayes Estimation

    Walid Aydi1,3,*, Fuad S. Alduais2,4

    CMC-Computers, Materials & Continua, Vol.71, No.2, pp. 4033-4050, 2022, DOI:10.32604/cmc.2022.023119

    Abstract The Weibull distribution is regarded as among the finest in the family of failure distributions. One of the most commonly used parameters of the Weibull distribution (WD) is the ordinary least squares (OLS) technique, which is useful in reliability and lifetime modeling. In this study, we propose an approach based on the ordinary least squares and the multilayer perceptron (MLP) neural network called the OLSMLP that is based on the resilience of the OLS method. The MLP solves the problem of heteroscedasticity that distorts the estimation of the parameters of the WD due to the presence of outliers, and eases… More >

  • Open Access

    ARTICLE

    Breast Cancer Detection and Classification Using Deep CNN Techniques

    R. Rajakumari1,*, L. Kalaivani2

    Intelligent Automation & Soft Computing, Vol.32, No.2, pp. 1089-1107, 2022, DOI:10.32604/iasc.2022.020178

    Abstract Breast cancer is a commonly diagnosed disease in women. Early detection, a personalized treatment approach, and better understanding are necessary for cancer patients to survive. In this work, a deep learning network and traditional convolution network were both employed with the Digital Database for Screening Mammography (DDSM) dataset. Breast cancer images were subjected to background removal followed by Wiener filtering and a contrast limited histogram equalization (CLAHE) filter for image restoration. Wavelet packet decomposition (WPD) using the Daubechies wavelet level 3 (db3) was employed to improve the smoothness of the images. For breast cancer recognition, these preprocessed images were first… More >

  • Open Access

    A Global Training Model for Beat Classification Using Basic Electrocardiogram Morphological Features

    Shubha Sumesh1, John Yearwood1, Shamsul Huda1 and Shafiq Ahmad2,*

    CMC-Computers, Materials & Continua, Vol.70, No.3, pp. 4503-4521, 2022, DOI:10.32604/cmc.2022.015474

    Abstract

    Clinical Study and automatic diagnosis of electrocardiogram (ECG) data always remain a challenge in diagnosing cardiovascular activities. The analysis of ECG data relies on various factors like morphological features, classification techniques, methods or models used to diagnose and its performance improvement. Another crucial factor in the methodology is how to train the model for each patient. Existing approaches use standard training model which faces challenges when training data has variation due to individual patient characteristics resulting in a lower detection accuracy. This paper proposes an adaptive approach to identify performance improvement in building a training model that analyze global training… More >

  • Open Access

    ARTICLE

    Classification of Foot Pressure Images Using Machine Learning Algorithm

    P. Ramya1, B. Padmapriya2, S. Poornachandra3

    Computer Systems Science and Engineering, Vol.41, No.1, pp. 187-196, 2022, DOI:10.32604/csse.2022.020185

    Abstract Arthritis is an acute systemic disease of a joint accompanied by pain. In developed countries, it mainly causes disability among people over 50 years of age. Rheumatoid Arthritis is a type of arthritis that occurs commonly among elders. The incidence of arthritis is higher in females than in males. There is no permanent diagnosis method for arthritis, but if it was identified in the early stages based on the foot pressure, it can be diagnosed before attaining the critical stage of Rheumatoid Arthritis. The analysis and study of arthritis patients were done using design thinking methodology. Design thinking is a… More >

  • Open Access

    ARTICLE

    Applying ANN, ANFIS and LSSVM Models for Estimation of Acid Solvent Solubility in Supercritical CO2

    Amin Bemani1, Alireza Baghban2, Shahaboddin Shamshirband3, 4, *, Amir Mosavi5, 6, 7, Peter Csiba7, Annamaria R. Varkonyi-Koczy5, 7

    CMC-Computers, Materials & Continua, Vol.63, No.3, pp. 1175-1204, 2020, DOI:10.32604/cmc.2020.07723

    Abstract In the present work, a novel machine learning computational investigation is carried out to accurately predict the solubility of different acids in supercritical carbon dioxide. Four different machine learning algorithms of radial basis function, multi-layer perceptron (MLP), artificial neural networks (ANN), least squares support vector machine (LSSVM) and adaptive neuro-fuzzy inference system (ANFIS) are used to model the solubility of different acids in carbon dioxide based on the temperature, pressure, hydrogen number, carbon number, molecular weight, and the dissociation constant of acid. To evaluate the proposed models, different graphical and statistical analyses, along with novel sensitivity analysis, are carried out.… More >

  • Open Access

    ARTICLE

    The MLPG Method for Crack Analysis in Anisotropic Functionally Graded Materials

    J. Sladek1, V. Sladek, Ch.Zhang2

    Structural Durability & Health Monitoring, Vol.1, No.2, pp. 131-144, 2005, DOI:10.3970/sdhm.2005.001.131

    Abstract A meshless method based on the local Petrov-Galerkin approach is proposed for crack analysis in two-dimensional (2-d), anisotropic and linear elastic solids with continuously varying material properties. Both quasi-static and transient elastodynamic problems are considered. For time-dependent problems, the Laplace-transform technique is utilized. A unit step function is used as the test function in the local weak-form. It is leading to local boundary integral equations (LBIEs) involving only a domain-integral in the case of transient dynamic problems. The analyzed domain is divided into small subdomains with a circular shape. The moving least-squares (MLS) method is adopted for approximating the physical… More >

  • Open Access

    ARTICLE

    Carcinoembryonic antigen inhibits neutrophil activation by N-formyl-methionyl-leucyl-phenylalanine

    Anna PAŃCZYSZYN1 *, Anna KROP-WATOREK1,2, Maciej WIECZOREK1

    BIOCELL, Vol.39, No.2-3, pp. 1-4, 2015, DOI:10.32604/biocell.2015.39.001

    Abstract Carcinoembryonic antigen (CEA) is a surface glycoprotein expressed in human epithelial cells and is released from their surface, especially during colorectal cancer. Frequently, colorectal cancer is accompanied by inflammation, where tumor-infiltrating neutrophils play an important role. CEA was also found to be a strong chemotactic agent for neutrophils. The purpose of this study was to find out if CEA can enhance neutrophil priming and activation. Primed neutrophils were activated by N-formyl-methionyl-leucyl-phenylalanine (formyl-MLP) and the resulting oxidative burst was measured luminometrically. Unexpectedly, in vitro priming of neutrophils by CEA, alone or preceded by LPS, inhibited subsequent activation of these cells by… More >

  • Open Access

    ARTICLE

    The impact of paralog genes: detection of copy number variation in spinal muscle atrophy patients

    Sergio LAURITO1, 2, Juan A. CUETO1, 3, Jimena PEREZ1, María ROQUÉ1, 2

    BIOCELL, Vol.42, No.3, pp. 87-92, 2018, DOI:10.32604/biocell.2018.07016

    Abstract Spinal muscular atrophy (SMA) is caused by dysfunction of the alpha motor neurons of the spinal cord. It is an autosomal recessive disease associated to the SMN1 gene, located in the subtelomeric region of 5q13. A paralog SMN2 gene is located at the centromeric region of the same chromosome, which apparently originated by an ancestral inverted duplication occurring only in humans. The exon sequence differs in two nucleotides in exon 7 and exon 8, which leads to an SMN2 transcript that lacks exon 7 and results in a truncated protein. Part (10%) of the SMN2 transcripts avoids the splicing of… More >

  • Open Access

    ARTICLE

    The MLPG for Bending of Electroelastic Plates

    J. Sladek1, V. Sladek1, P. Stanak1, E. Pan2

    CMES-Computer Modeling in Engineering & Sciences, Vol.64, No.3, pp. 267-298, 2010, DOI:10.3970/cmes.2010.064.267

    Abstract The plate equations are obtained by means of an appropriate expansion of the mechanical displacement and electric potential in powers of the thickness coordinate in the variational equation of electroelasticity and integration through the thickness. The appropriate assumptions are made to derive the uncoupled equations for the extensional and flexural motion. The present approach reduces the original 3-D plate problem to a 2-D problem, with all the unknown quantities being localized in the mid-plane of the plate. A meshless local Petrov-Galerkin (MLPG) method is then applied to solve the problem. Nodal points are randomly spread in the mid-plane of the… More >

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