Tae-Hyuk Ahn¹, Layne T. Watson^1,2, Yang Cao^1,1, Clifford A. Shaffer¹, William T. Baumann³

CMES-Computer Modeling in Engineering & Sciences, Vol.51, No.1, pp. 27-52, 2009, DOI:10.3970/cmes.2009.051.027

Abstract For biochemical systems, where some chemical species are represented by small numbers of molecules, discrete and stochastic approaches are more appropriate than continuous and deterministic approaches. The continuous deterministic approach using ordinary differential equations is adequate for understanding the average behavior of cells, while the discrete stochastic approach accurately captures noisy events in the growth-division cycle. Since the emergence of the stochastic simulation algorithm (SSA) by Gillespie, alternative algorithms have been developed whose goal is to improve the computational efficiency of the SSA. This paper explains and empirically compares the performance of some of these More >

RAQUEL ALVES DOS SANTOS¹, TERESINHA ROSA CABRAL², ISABEL ROSA CABRAL², LUSÂNIA MARIA GREGGI ANTUNES^3,4, CRISTIANE PONTES ANDRADE³, PLÍNIO CERQUEIRA DOS SANTOS CARDOSO¹, MARCELO DE OLIVEIRA BAHIA², CLAUDIA PESSOA⁵, JOSÉ LUIS MARTINS DO NASCIMENTO², ROMMEL RODRÍGUEZ BURBANO², CATARINA SATIE TAKAHASHI^1,6

BIOCELL, Vol.32, No.2, pp. 195-200, 2008, DOI:10.32604/biocell.2008.32.195

Abstract Physalis angulata L (Solanaceae) is a medicinal plant from North of Brazil, whose different extracts and infusions are commonly used in the popular medicine for the treatment of malaria, asthma, hepatitis, dermatitis and rheumatism. However, the genotoxic effects of P. angulata on human cells is not well known. The main purpose of the present study was to evaluate the in vitro genotoxic effects of aqueous extract of P. angulata using the comet assay and the micronucleus assay in human lymphocytes provided from 6 healthy donors. Treatments with P. angulata extracts were performed in vitro in order to access the extent of More >

N. Ohno¹, D. Okumura¹

The International Conference on Computational & Experimental Engineering and Sciences, Vol.4, No.4, pp. 207-214, 2007, DOI:10.3970/icces.2007.004.207

Abstract The self energy of geometrically necessary dislocations (GNDs) is considered to inevitably introduce the higher-order stress work-conjugate to slip gradient in single crystals. It is pointed out that this higher-order stress stepwise changes in response to in-plane slip gradient and thus directly influences the onset of initial yielding in polycrystals. The self energy of GNDs is then incorporated into the strain gradient theory of Gurtin (2002). The resulting theory is applied to model crystal grains of size D, leading to a D-1-dependent term with a coefficient determined by grain shape and orientation. It is thus More >

ALEJANDRA L. ESTEBENET^✝, PABLO R. MARTÍN, SILVANA BURELA

BIOCELL, Vol.30, Suppl.S, pp. 329-335, 2006

Abstract This article has no abstract. More >

K. HIDALGO¹, I. G. ROJAS², A. B. PENISSI³, M. I. RUDOLPH¹

BIOCELL, Vol.29, No.3, pp. 303-311, 2005, DOI:10.32604/biocell.2005.29.303

Abstract TNFα has been associated with both, tumor survival and apoptosis. This cytokine is also involved in promoting cell migration during wound healing and tumorigenesis. SW756 is a HPV18-positive cervical carcinoma cell line, which has been used to study different mechanisms of cervical cancer progression. An in vitro assay of scratch wound healing onto monolayers of SW756 cells was used to assess the effect of TNFα on cell migration into a wound space. It was found that SW756 cells have the ability to migrate, but not proliferate in response to scratch wounding in a serum-free medium supplemented More >

Hong Qian¹

Molecular & Cellular Biomechanics, Vol.1, No.4, pp. 267-278, 2004, DOI:10.3970/mcb.2004.001.267

Abstract In recent single-particle tracking (SPT) measurements on Listeria monocytogenes motility in cells [Kuo and McGrath (2000)], the actin-based stochastic dynamics of the bacterium movement has been analyzed statistically in terms of the mean-square displacement (MSD) of the trajectory. We present a stochastic analysis of a simplified polymerization Brownian ratchet (BR) model in which motions are limited by the bacterium movement. Analytical results are obtained and statistical data analyses are investigated. It is shown that the MSD of the stochastic bacterium movement is a monotonic quadratic function while the MSD for detrended trajectories is linear. Both the More >