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  • Open Access

    ARTICLE

    Selection and validation of reference genes for quantitative real-time polymerase chain reaction analyses of Serratia ureilytica DW2

    FENGLIN BAI1,2,#, BIANXIA BAI1,2,#, TINGTING JIN1,2, GUIPING ZHANG1,2, JIAHONG REN1,2,*

    BIOCELL, Vol.47, No.3, pp. 647-656, 2023, DOI:10.32604/biocell.2023.024758 - 03 January 2023

    Abstract Background: Serratia ureilytica DW2 is a highly efficient phosphate-solubilizing bacteria isolated from Codonopsis pilosula rhizosphere soil that can promote the growth of C. pilosula; nonetheless, until now, no validated reference genes from the genus Serratia have been reported that can be used for the normalization of quantitative real-time polymerase chain reaction (RT–qPCR) data. Methods: To screen stable reference genes of S. ureilytica DW2, the expression of its eight candidate reference genes (16S rRNA, ftsZ, ftsA, mreB, recA, slyD, thiC, and zipA) under different treatment conditions (pH, temperature, culture time, and salt content) was assayed by RT–qPCR. The expression stability of these genes was analyzed using… More >

  • Open Access

    ARTICLE

    Selection of Stable Reference Genes for Quantitative Real-Time PCR on Herbaceous Peony (Paeonia lactiflora Pall.) in Response to Drought Stress

    Zhipeng Sheng, Yuting Luan, Cong Xu, Jun Tao*, Daqiu Zhao*

    Phyton-International Journal of Experimental Botany, Vol.92, No.3, pp. 801-814, 2023, DOI:10.32604/phyton.2023.024953 - 29 November 2022

    Abstract Herbaceous peony (Paeonia lactiflora Pall.), as a high-end cut flower in the international market, has high ornamental and medicinal values. But in Northern China, drought is a major environmental factor influencing the growth and development of P. lactiflora. Quantitative real-time polymerase chain reaction (qRT-PCR) can evaluate gene expression levels under different stress conditions, and stable internal reference is the key for qRT-PCR. At present, there is no systematic screening of internal reference for correcting gene expressions of P. lactiflora in response to drought stress. In this study, 10 candidate genes [ubiquitin (UBQ2), UBQ1, elongation factor 1-α (EF-1α), Histidine (His), eukaryotic… More >

  • Open Access

    ARTICLE

    Correlations among core species corresponding to the clinical staging of periodontitis

    QIAN ZHANG1,#, MIN ZHEN2,#, PENG LI3, XIAOPEI CHI4,*, YIFEI ZHANG1,*

    BIOCELL, Vol.47, No.2, pp. 431-439, 2023, DOI:10.32604/biocell.2023.024948 - 18 November 2022

    Abstract The correlation between microbiota plays a vital role in the progression of periodontal disease. This study investigated the in situ interaction networks between periodontal pathogens in periodontal and peri-implant disease. We used quantitative real-time polymerase chain reaction and Pearson’s correlation coefficients to quantify the copy numbers and correlations of four oral core species—Fusobacterium nucleatum, Porphyromonas gingivalis, Prevotella intermedia, and Streptococcus gordonii—from 80 subgingival sites (healthy and with periodontitis or gingivitis) in patients with periodontitis, and 68 subgingival sites (healthy and with periodontitis, gingivitis, peri-implantitis, or peri-implant mucositis) in patients with implants. The highest bacterial counts were observed for Porphyromonas gingivalisMore >

  • Open Access

    ARTICLE

    Quantitative Extraction of p-Coumaric Acid and Ferulic Acid in Different Gramineous Materials and Structural Changes of Residual Alkali Lignin

    Tanhao Zhang, Shuo Zhang, Wu Lan*, Fengxia Yue*

    Journal of Renewable Materials, Vol.11, No.2, pp. 555-566, 2023, DOI:10.32604/jrm.2023.025701 - 22 September 2022

    Abstract Ferulic acid (FA) and p-coumaric acid (pCA) in bagasse, wheat straw, corn straw, and corncob were extracted by alkaline hydrolysis and characterized by gas chromatography (GC) and gas chromatography-mass spectrometry (GC-MS). It was found that the FA and most of the pCA in gramineous biomass could be dissociated and released after being treated with 1 M NaOH at 100°C for 4 h. The yields of pCA/FA in bagasse, wheat straw, corn straw, and corncob determined by GC-FID are 39.8/11.5, 13.7/11.0, 28.0/11.0, and 35.1/14.5 mg/g, respectively. The raw materials and the treated solid residues were characterized by gel-state… More > Graphic Abstract

    Quantitative Extraction of <i>p</i>-Coumaric Acid and Ferulic Acid in Different Gramineous Materials and Structural Changes of Residual Alkali Lignin

  • Open Access

    ARTICLE

    Rapid Analysis of Four Alkaloids in Uncaria rhynchophylla by Core-Shell Column HPLC and Quantitative Analysis of Multi-Components by Single Marker (QAMS)

    Kesheng Lin1,2, Jiawen Zhou1,2, Lijuan Han1,2, Ning Li1,2,*

    Phyton-International Journal of Experimental Botany, Vol.92, No.1, pp. 285-296, 2023, DOI:10.32604/phyton.2022.023219 - 06 September 2022

    Abstract As a traditional herbal medicine, the major alkaloids in Uncaria rhynchophylla have been proven to have blood pressure-lowering and sedative effects. It is essential to develop an effective method for the determination of the major alkaloids in U. rhynchophylla. In this research, a rapid quantitative analysis involving multi-components analysis by a single marker strategy coupled with core-shell column HPLC was adopted to analyse four alkaloids (corynoxeine, isocorynoxeine, isorhynchophylline, rhynchophylline) in U. rhynchophylla. Isorhynchophylline was selected as the internal reference substance, the content of which was determined by the traditional external standard method. Relative correction factors (RCF) between isorhynchophylline More >

  • Open Access

    ARTICLE

    Analysis of Channeling-Path Phenomena in a Complex Fault-Block Reservoir with Low Recovery Factor and High Water-Cut Ratio

    Qunyi Wang1, Xiaoli Ma1, Yongbin Bi1, Haiyan He1, Xiao Gu1, Tongjing Liu2,*, Lekun Zhao3

    FDMP-Fluid Dynamics & Materials Processing, Vol.19, No.2, pp. 361-377, 2023, DOI:10.32604/fdmp.2022.020358 - 29 August 2022

    Abstract Current methods for the analysis of channeling-path phenomena in reservoirs cannot account for the influence of time and space on the actual seepage behavior. In the present study, this problem is addressed considering actual production data and dynamic characteristic parameters quantitatively determined in the near wellbore area by fitting the water-cut curve of the well. Starting from the dynamic relationship between injection and production data, the average permeability is determined and used to obtain a real-time quantitative characterization of the seepage behavior of the channeling-path in the far wellbore area. For the considered case study More >

  • Open Access

    ARTICLE

    Developing Reliable Digital Healthcare Service Using Semi-Quantitative Functional Resonance Analysis

    Zhengshu Zhou*, Yutaka Matsubara, Hiroaki Takada

    Computer Systems Science and Engineering, Vol.45, No.1, pp. 35-50, 2023, DOI:10.32604/csse.2023.030848 - 16 August 2022

    Abstract Since entering the era of Industry 4.0, the concept of Healthcare 4.0 has also been put forward and explored by researchers. How to use Information Technology (IT) to better serve people’s healthcare is one of the most featured emerging directions in the academic circle. An important field of Healthcare 4.0 research is the reliability engineering of healthcare service. Because healthcare systems often affect the health and even life of their users, developers must be very cautious in the design, development, and operation of these healthcare systems and services. The problems to be solved include the More >

  • Open Access

    ARTICLE

    A Novel Method for the Quantitative Detection of Sericin Content in Silk Fiber Based on the Ratio of Aspartate to Alanine

    Yanfei Feng, Jiaming Lin, Longxing Niu, Peng Pan, Xueping Liu, Linling Huang, Ying Guo, Mingzhong Li*

    Journal of Renewable Materials, Vol.11, No.1, pp. 167-184, 2023, DOI:10.32604/jrm.2022.021339 - 10 August 2022

    Abstract The development of a method for the quantitative determination of the sericin content ratio (SCR) is urgently needed for silk refining and the purification of silk fibroin for biomedical applications. In this work, a series of sericin/fibroin mixed samples with known SCRs were prepared by mixing initial samples of extracted sericin and fibroin from Bombyx mori silk. Significant differences were found in the contents of characteristic hydrophilic amino acids abundant in sericin and hydrophobic amino acids abundant in fibroin, and several linear relationships of SCR associated with the content ratios of Ser/Ala, Asp/Ala, Lys/Ala, Asp/Gly and… More > Graphic Abstract

    A Novel Method for the Quantitative Detection of Sericin Content in Silk Fiber Based on the Ratio of Aspartate to Alanine

  • Open Access

    ARTICLE

    Mechanical Properties and Evolution of Microstructure of Cement Stabilized Loess

    Kangze Yuan1, Kui Liu1,2,*, Guoyang Yi3, Bowen Yang2

    Journal of Renewable Materials, Vol.10, No.12, pp. 3611-3627, 2022, DOI:10.32604/jrm.2022.022458 - 14 July 2022

    Abstract Cement Stabilized Loess (CSL) sample has a long history as a method of improving building foundations. In this paper, the main physical (specific gravity, consistency limit, optimum moisture content, and maximum dry density) and mechanical properties (Unconfined Compressive Strength (UCS) and shear strength parameters) of CSL samples with different cement content were investigated, and the change reasons were explored by mean of SEM test. Meanwhile, quantitative analysis software Image-Pro Plus (IPP) 6.0 was used to characterize the microstructural evolution of pores in compacted loess and CSL sample. As the cement content increased, the specific gravity… More > Graphic Abstract

    Mechanical Properties and Evolution of Microstructure of Cement Stabilized Loess

  • Open Access

    ARTICLE

    Compared Insights on Machine-Learning Anomaly Detection for Process Control Feature

    Ming Wan1, Quanliang Li1, Jiangyuan Yao2,*, Yan Song3, Yang Liu4, Yuxin Wan5

    CMC-Computers, Materials & Continua, Vol.73, No.2, pp. 4033-4049, 2022, DOI:10.32604/cmc.2022.030895 - 16 June 2022

    Abstract Anomaly detection is becoming increasingly significant in industrial cyber security, and different machine-learning algorithms have been generally acknowledged as various effective intrusion detection engines to successfully identify cyber attacks. However, different machine-learning algorithms may exhibit their own detection effects even if they analyze the same feature samples. As a sequence, after developing one feature generation approach, the most effective and applicable detection engines should be desperately selected by comparing distinct properties of each machine-learning algorithm. Based on process control features generated by directed function transition diagrams, this paper introduces five different machine-learning algorithms as alternative… More >

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