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    ARTICLE

    Identification of Polymorphic Markers by High-Resolution Melting (HRM) Assay for High-Throughput SNP Genotyping in Maize

    Zhigang Shang1,2, Yongzhe Zhu3, Xinmei Guo1,2, Meiai Zhao1,4,*

    Phyton-International Journal of Experimental Botany, Vol.90, No.6, pp. 1711-1725, 2021, DOI:10.32604/phyton.2021.015048

    Abstract The development of next generation sequencing (NGS) and high throughput genotyping are important techniques for the QTL mapping and genetic analysis of different crops. High-resolution melting (HRM) is an emerging technology used for detecting single-nucleotide polymorphisms (SNPs) in various species. However, its use is still limited in maize. The HRM analysis was integrated with SNPs to identify three types of populations (NIL population, RIL population and natural population), and the useful tags were screened. The patterns of temperature-shifted melting curves were investigated from the HRM analysis, and compared these with the kit. Among all 48 pairs of primers, 10 pairs… More >

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