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  • Open Access

    REVIEW

    Enhanced sampling for lipid-protein interactions during membrane dynamics

    DIEGO MASONE1,2,*

    BIOCELL, Vol.47, No.1, pp. 1-14, 2023, DOI:10.32604/biocell.2023.024146

    Abstract The inflexible concept of membrane curvature as an independent property of lipid structures is today obsolete. Lipid bilayers behave as many-body entities with emergent properties that depend on their interactions with the environment. In particular, proteins exert crucial actions on lipid molecules that ultimately condition the collective properties of the membranes. In this review, the potential of enhanced molecular dynamics to address cell-biology problems is discussed. The cases of membrane deformation, membrane fusion, and the fusion pore are analyzed from the perspective of the dimensionality reduction by collective variables. Coupled lipid-protein interactions as fundamental determinants of large membrane remodeling events… More >

  • Open Access

    ARTICLE

    Extremal Coalitions for Influence Games Through Swarm Intelligence-Based Methods

    Fabián Riquelme1,*, Rodrigo Olivares1, Francisco Muñoz1, Xavier Molinero3, Maria Serna2

    CMC-Computers, Materials & Continua, Vol.70, No.3, pp. 6305-6321, 2022, DOI:10.32604/cmc.2022.021804

    Abstract An influence game is a simple game represented over an influence graph (i.e., a labeled, weighted graph) on which the influence spread phenomenon is exerted. Influence games allow applying different properties and parameters coming from cooperative game theory to the contexts of social network analysis, decision-systems, voting systems, and collective behavior. The exact calculation of several of these properties and parameters is computationally hard, even for a small number of players. Two examples of these parameters are the length and the width of a game. The length of a game is the size of its smaller winning coalition, while the… More >

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