Ashuai Du^1,#, Dianbin Guo^2,#, Dongbo Yuan^3,#, Kai Li⁴, Yuanyuan Luo⁴, Songsong Tan³, Xuchao Dai⁴, Bo Yu⁵, Wanxiang You⁶, Junjie Zhao⁷, Bo Yan³, Kehua Jiang^3,*, Xiaofei Fan^2,*, Jianguo Zhu^3,*,*

Oncology Research, Vol.34, No.5, 2026, DOI:10.32604/or.2026.076716 - 22 April 2026

Abstract Background: Bisphenol A (BPA) is a widely used industrial chemical and endocrine-disrupting compound, and accumulating evidence suggests that it may contribute to prostate cancer progression; however, the underlying molecular mechanisms remain incompletely elucidated. This study aimed to elucidate the molecular targets and signaling pathways underlying BPA-induced prostate cancer progression. Methods: In this study, an integrated strategy combining network toxicology, molecular docking, and molecular dynamics simulations was employed to identify potential BPA-related targets and signaling pathways involved in prostate cancer. Candidate targets were retrieved from public databases, followed by protein-protein interaction network analysis to screen key… More >

Farzana Yasmeen^1,#, Abdul Manan^1,#,*, Wook Kim¹, Sangdun Choi^1,2,*

Oncology Research, Vol.34, No.5, 2026, DOI:10.32604/or.2026.076072 - 22 April 2026

Abstract Objectives: Vascular endothelial growth factor receptor 2 (VEGFR2) is a critical therapeutic target in hepatocellular carcinoma (HCC) due to its role in angiogenesis and tumor progression. While several inhibitors are currently used, clinical utility is often limited by resistance and adverse effects, necessitating the discovery of novel therapeutic agents. The aim of this study was to identify and characterize novel, highly effective VEGFR2 inhibitors using an integrated computational pipeline to advance the development of new HCC treatments. Methods: A comprehensive dataset from the ChEMBL database was curated and standardized for Quantitative Structure-Activity Relationship (QSAR) modeling.… More > Graphic Abstract

Yiming Chen^1,2, Qiong Luo^1,*

Phyton-International Journal of Experimental Botany, Vol.95, No.3, 2026, DOI:10.32604/phyton.2026.077896 - 31 March 2026

Abstract Lycium ruthenicum Murray (black goji berry) is an economically important crop rich in anthocyanins, however, the post-transcriptional regulatory mechanisms underlying anthocyanin accumulation in its fruits are unknown. Here, we used whole-transcriptome sequencing to identify differentially expressed circRNAs and lncRNAs in black goji (BS4) and white goji (WS4). Furthermore, we analyzed the regulatory networks of the key ncRNAs and their target genes by combining targeted phytohormone metabolomics with molecular docking technology. We found that the circRNA plantcirc_001165 synergistically upregulated the flavonoid biosynthesis gene LrHCT with the lncRNA MSTRG.28703 to promote anthocyanin accumulation. However, MSTRG.28703 repressed LrZOX1 expression, leading More >

Luis Felipe HernáNdez-Ayala¹, Russel J. Reiter², Annia Galano^1,*

BIOCELL, Vol.50, No.1, 2026, DOI:10.32604/biocell.2025.071635 - 23 January 2026

Abstract Objectives: Oxidative stress (OS) plays a pivotal role in chronic and neurodegenerative diseases, which has sparked interest in molecules that modulate redox-regulating enzymes. Melatonin and its metabolites exhibit antioxidant properties; however, their molecular mechanisms of enzymatic and transcriptional modulation remain unclear. This study aimed to investigate, through an exploratory in silico approach, the interactions of melatonin and related compounds with OS-related enzymes to generate hypotheses about their role in cellular redox control. Methods: A rational selection of antioxidant, pro-oxidant, and transcriptional targets was performed. Ligands were optimized at the DFT level (M05-2X/6-311+G(d,p)) and docked to OS… More >

Wenxiang Zhang^1,2, Wenning Cui¹, Juan Huang³, Zhangen Lu¹, Kuijing Liang¹, Lingbao Wang^1,2, Shanshan Wei^1,2, Liran Shi¹, Huifen Li¹, Xiaoli Guo^1,2,*, Jianhui Ma^4,*

Phyton-International Journal of Experimental Botany, Vol.94, No.12, pp. 3893-3912, 2025, DOI:10.32604/phyton.2025.073736 - 29 December 2025

Abstract UDP-glycosyltransferases (UGTs) play essential roles in plant secondary metabolism and stress responses, yet their composition and functions in Sorghum bicolor, a model C4 plant, remain inadequately characterized. This study identified 196 SbUGT genes distributed across all 10 chromosomes and classified them into 16 subfamilies (A–P) through phylogenetic analysis. Among these, 61.2% were intronless, and 10 conserved motifs, including the UGT-specific PSPG box, were identified. Synteny analysis using MCScanX revealed 12 segmental duplication events and conserved syntenic relationships with other Poaceae species (rice, maize, and barley). Promoter analysis uncovered 125 distinct cis-acting elements, predominantly associated with stress and… More >

Heba A. S. El-Nashar^1,*, Ahmed T. Negmeldin^2,3,*, Aziza El Baz⁴, Marizé Cuyler⁵, Brandon Alston⁵, Namrita Lall^5,6,7, Naglaa S. Ashmawy^1,8,*

Phyton-International Journal of Experimental Botany, Vol.94, No.10, pp. 3269-3281, 2025, DOI:10.32604/phyton.2025.067998 - 29 October 2025

Abstract Pimenta dioica is a tropical Caribbean tree belonging to the family Myrtaceae, widely used in various human activities, including perfume production, food flavoring, natural pesticides, and medicine. This study aimed to explore the chemical composition of Pimenta dioica flower essential oil obtained via hydrodistillation using GC-MS analysis. Additionally, the oil’s tyrosinase inhibitory activity was investigated. The effectiveness of the oil’s major constituents in binding to tyrosinase was also evaluated through molecular docking simulations. GC-MS analysis identified fifteen compounds, with eugenol (70.59%) as the major component, followed by β-myrcene (10.54%), limonene (8.55%), β-ocimene (4.92%), α-phellandrene (1.39%), and linalool… More >

Ting Wei^1,2,#, Pengli Wei^2,3,#, Yalei Wang^1,2, Yaqiu Mao^2,3, Jian Yan², Xiaotong Hu², Zhenze Qi², Xu Cai², Changkai Jia², Zhiyuan Zhao², Bingkun Li², Min Qiao², Yaxin Zou^2,3, Tingting Yang⁴, Shiyang Sun², Xuesong Feng³, Pengyun Li^2,*, Hongzhou Shang^1,*, Zhibing Zheng²

Oncology Research, Vol.33, No.10, pp. 2981-3006, 2025, DOI:10.32604/or.2025.065123 - 26 September 2025

Abstract Objectives: Immunomodulatory drugs (IMiDs), functioning as molecular glue degraders, have been approved for treating various hematological malignancies; however, the inevitable acquired drug resistance resulting from their skeletal similarity and hematological toxicities poses significant obstacles to their clinical treatment. The study aimed to develop degraders with potent efficiency and low toxicity. Methods: Phenotypic profiling, elaborate structure-activity relationships (SAR), rational drug design and degradation profiles investigations, quantitative proteomics analysis and cell-based functional studies, and pharmacokinetic studies were conducted to develop more potent degraders. Results: This study developed novel CRBN-binding moieties through methylene deletion in lenalidomide’s isoindole core. Lead… More > Graphic Abstract

Yu-Hsien Lin^*, Po-Cheng Chuang, Joyce Yi-Tzu Huang

CMC-Computers, Materials & Continua, Vol.84, No.3, pp. 4907-4948, 2025, DOI:10.32604/cmc.2025.065995 - 30 July 2025

Abstract This study proposes an automatic control system for Autonomous Underwater Vehicle (AUV) docking, utilizing a digital twin (DT) environment based on the HoloOcean platform, which integrates six-degree-of-freedom (6-DOF) motion equations and hydrodynamic coefficients to create a realistic simulation. Although conventional model-based and visual servoing approaches often struggle in dynamic underwater environments due to limited adaptability and extensive parameter tuning requirements, deep reinforcement learning (DRL) offers a promising alternative. In the positioning stage, the Twin Delayed Deep Deterministic Policy Gradient (TD3) algorithm is employed for synchronized depth and heading control, which offers stable training, reduced overestimation… More >

Bouslamti Mohammed¹, Nouioura Ghizlane¹, Tbatou Widad¹, Mohamed Chebaibi^2,3, Abdulsalam Alhalmi⁴, Najoua Soulo¹, Sulaiman Mohammed Alnasser⁵, Fahad M Alshabrmi⁶, Amine Elbouzidi^7,*, Lyoussi Badiaa¹, Benjelloun Ahmed Samir¹

Phyton-International Journal of Experimental Botany, Vol.94, No.5, pp. 1505-1518, 2025, DOI:10.32604/phyton.2025.063896 - 29 May 2025

Abstract The Solanum genus is known for its diverse bioactive compounds, yet its diuretic potential remains understudied. This research commenced with an analysis of polyphenol and flavonoid content in Solanum elaeagnifolium leaf extract (SEFE) using colorimetric techniques, followed by HPLC-DAD to delineate its chemical composition. The aqueous extract revealed prominent constituents: naringin (12.38%), quercetin 3-O-B-D-Glucoside (27.25%), and flavone (15.26%). A 15-day study on normal rats investigated the diuretic potential of SEFE at repeated doses. SEFE significantly increased urine volume and urinary sodium/potassium levels without inducing hypokalaemia, contrasting with furosemide, a standard diuretic that induced hypokalaemia. Conversely, furosemide, a… More >

Hamada Imtara^1,2,*, Feras Abujaber¹, Faady Siouri¹, Aziz Tumeh¹, Bashar Saad²

Phyton-International Journal of Experimental Botany, Vol.94, No.3, pp. 723-737, 2025, DOI:10.32604/phyton.2025.063403 - 31 March 2025

Abstract Traditional Palestinian medicine uses Thymus capitatus (T. capitatus), a plant recognized for its therapeutic properties due to its high concentration of essential oils such as thymol and carvacrol, to treat skin diseases, gastrointestinal disorders, and respiratory infections. The present study was conducted to evaluate the antioxidant and anticancer activities of T. capitatus essential oil (EO). Moreover, this study employed computational methods including ADMET analysis and molecular docking. Using Gas chromatography-mass spectrometry (GC-MS) analysis, the phytochemical composition of T. capitatus essential oil was identified. The DPPH scavenging method was used to assess antioxidant activity. The Michigan Cancer Foundation-7 (MCF-7) and… More >