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  • Open Access

    ARTICLE

    Genetic Diversity, Population Structure, and Genome-Wide Association Study of Seven Agronomic Traits in 273 Diverse Upload Cotton Accessions

    Yajun Liang1,2,#, Juyun Zheng1,#, Junduo Wang1,#, Zhaolong Gong1, Zhiqiang Li3, Ling Min4, Zeliang Zhang2, Zhiwei Sang2, Yanying Qu2, Xueyuan Li1,*, Quanjia Chen2,*

    Phyton-International Journal of Experimental Botany, Vol.92, No.12, pp. 3345-3357, 2023, DOI:10.32604/phyton.2023.028755

    Abstract Upland cotton (Gossypium hirsutum) is the most important plant producing natural fibers for the textile industry. In this study, we first investigated the phenotypic variation of seven agronomic traits of 273 diverse cotton accessions in the years 2017 and 2018, which were from 18 geographical regions. We found large variations among the traits in different geographical regions and only half of the traits in either years 2017 or 2018 followed a normal distribution. We then genotyped the collection with 81,612 high quality SNPs. Phylogenetic tree and population structure revealed a diverse genetic structure of the core collection, and geographical diversification… More >

  • Open Access

    ARTICLE

    Comparative Transcriptome Analysis of Seed Germination of a Cotton Variety with High Tolerance to Low Temperature

    Genhai Hu1,*, Maoni Chao1, Xiuren Zhou2, Yuanzhi Fu2

    Phyton-International Journal of Experimental Botany, Vol.92, No.9, pp. 2535-2554, 2023, DOI:10.32604/phyton.2023.030163

    Abstract Gossypium hirsutum L. is an important cash crop native to the subtropics and is widely cultivated around the world. Low temperature is an important stress that seriously affects seed germination and emergence during planting. In this study, transcriptomic profiles of low-temperature- and normal-temperature-germinated seeds of Xinluzao 25, a variety with low-temperature tolerance and high germination rates, were analyzed and compared. The following results were obtained. (1) A total of 81.06 Gb of clean data were obtained after transcriptome sequencing and assembly, and 76,931 non-redundant Unigene sequences were obtained after data consolidation and concatenation; of these, 69,883 Unigene sequences were annotated.… More >

  • Open Access

    ARTICLE

    Herbicide combinations to control the weed seedbank in an upland cotton field

    Pereira JR1, AE Duarte2, JB Pitombeira3, MAP da Silva2, NE de M Beltrão1, LM Barros2

    Phyton-International Journal of Experimental Botany, Vol.82, pp. 275-279, 2013, DOI:10.32604/phyton.2013.82.275

    Abstract An experiment was conducted in dryland conditions of the Brazilian Northeast to determine the number of viable weed seeds (seedbank) in an upland cotton crop, and its distribution in the soil profile, before and after using various herbicide treatments. A randomized block design in a split-plot block scheme with 6 replications was used, where the main plots were constituted by a factorial (13 treatments and 2 sampling soil depths), and the subplots by 2 sampling dates. The seedbank was determined by germination of the recovered weed seeds obtained from different soil depths. The highest number of viable weed seeds in… More >

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