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  • Open Access

    REVIEW

    Flesh Color Diversity of Sweet Potato: An Overview of the Composition, Functions, Biosynthesis, and Gene Regulation of the Major Pigments

    Hanna Amoanimaa-Dede, Chuntao Su, Akwasi Yeboah, Chunhua Chen, Shaoxia Yang, Hongbo Zhu*, Miao Chen*

    Phyton-International Journal of Experimental Botany, Vol.89, No.4, pp. 805-833, 2020, DOI:10.32604/phyton.2020.011979 - 09 November 2020

    Abstract Sweet potato is a multifunctional root crop and a source of food with many essential nutrients and bioactive compounds. Variations in the flesh color of the diverse sweet potato varieties are attributed to the different phytochemicals and natural pigments they produce. Among them, carotenoids and anthocyanins are the main pigments known for their antioxidant properties which provide a host of health benefits, hence, regarded as a major component of the human diet. In this review, we provide an overview of the major pigments in sweet potato with much emphasis on their biosynthesis, functions, and regulatory More >

  • Open Access

    ARTICLE

    Construction of castor functional markers fingerprint and analysis of genetic diversity

    TING YANG#, JIANNONG LU#, AKWASI YEBOAH, SHUAILEI GU, DONGNA LI, YUZHEN SHI, XUEGUI YIN*

    BIOCELL, Vol.44, No.3, pp. 381-388, 2020, DOI:10.32604/biocell.2020.09112 - 22 September 2020

    Abstract In order to provide a molecular basis for selecting good hybrid combinations for the identification of castor bean germplasm resources, fingerprint and genetic diversity analysis of 52 castor bean materials from 12 regions in 5 countries were constructed by using the Functinal Markers (FMs) associated with fatty acid metabolism-related genes. A total of 72 alleles were amplified by 29 pairs of FMs with an average of 2.483 per marker and the polymorphic information content was 0.103–0.695. Shannon’s information index (I), observed heterozygosity (Ho) and expected heterozygosity (He) were 0.699, 0.188 and 0.436 respectively. The clustering More >

  • Open Access

    ARTICLE

    Vegetative Compatibility and Virulence Diversity of Verticillium dahliae from Okra (Abelmoschus esculentus) Plantations in Turkey and Evaluation of Okra Landraces for Resistance to V. dahliae

    Fatih M. Tok1, Sibel Dervis2,*, Halit Yetisir3

    Phyton-International Journal of Experimental Botany, Vol.89, No.2, pp. 303-314, 2020, DOI:10.32604/phyton.2020.08801 - 22 April 2020

    Abstract Forty-four V. dahliae isolates were collected from symptomatic vascular tissues of okra plants each from a different field in eight provinces located in the eastern Mediterranean and western Anatolia regions of Turkey during 2006- 2009. Nitrate-nonutilizing (nit) mutants of V. dahliae from okra were used to determine heterokaryosis and genetic relatedness among isolates. All isolates from okra plants were grouped into two vegetative compatibility groups (VCGs) (1 and 2) and three subgroups as 1A (13.6%, 6/44), 2A (20.5%, 9/44) and 2B (65.9%, 29/44) according to international criteria. Pathogenicity tests were performed on a susceptible local okra (A. esculentus) landrace… More >

  • Open Access

    ARTICLE

    Recommender System Combining Popularity and Novelty Based on One-Mode Projection of Weighted Bipartite Network

    Yong Yu1, Yongjun Luo1, Tong Li2, Shudong Li3, *, Xiaobo Wu4, Jinzhuo Liu1, *, Yu Jiang3, *

    CMC-Computers, Materials & Continua, Vol.63, No.1, pp. 489-507, 2020, DOI:10.32604/cmc.2020.07616 - 30 March 2020

    Abstract Personalized recommendation algorithms, which are effective means to solve information overload, are popular topics in current research. In this paper, a recommender system combining popularity and novelty (RSCPN) based on one-mode projection of weighted bipartite network is proposed. The edge between a user and item is weighted with the item’s rating, and we consider the difference in the ratings of different users for an item to obtain a reasonable method of measuring the similarity between users. RSCPN can be used in the same model for popularity and novelty recommendation by setting different parameter values and More >

  • Open Access

    ARTICLE

    Novel Ensemble Modeling Method for Enhancing Subset Diversity Using Clustering Indicator Vector Based on Stacked Autoencoder

    Yanzhen Wang1, Xuefeng Yan1,*

    CMES-Computer Modeling in Engineering & Sciences, Vol.121, No.1, pp. 123-144, 2019, DOI:10.32604/cmes.2019.07052

    Abstract A single model cannot satisfy the high-precision prediction requirements given the high nonlinearity between variables. By contrast, ensemble models can effectively solve this problem. Three key factors for improving the accuracy of ensemble models are namely the high accuracy of a submodel, the diversity between subsample sets and the optimal ensemble method. This study presents an improved ensemble modeling method to improve the prediction precision and generalization capability of the model. Our proposed method first uses a bagging algorithm to generate multiple subsample sets. Second, an indicator vector is defined to describe these subsample sets. More >

  • Open Access

    ARTICLE

    Experimental evidence of soil bacteria abundance as the primary driver of rhizosphere priming effect

    Ma YP1,2,3#, ZJ Zhang1,2#, TQ Su1#, CA Busso4, ER Johnston5, XG Han1,6, XM Zhang2*

    Phyton-International Journal of Experimental Botany, Vol.87, pp. 286-291, 2018, DOI:10.32604/phyton.2018.87.286

    Abstract Soil microbial communities are thought to be responsible for the rhizosphere priming effect (RPE). However, because soil microbial communities are comprised of diverse components, very little is known about which component plays the critical role. In this study, soybean and cottonwood were grown at two latitudinal locations with different temperature and light conditions in-situ. We quantified RPE using a natural δ13C method, and measured the abundance, richness and composition of bacteria and fungi communities with DNA-based molecular methods. Among all potential variables, including the three aforementioned indexes of bacteria and fungi communities and soil physicochemical and More >

  • Open Access

    ARTICLE

    Genetic diversity of water primrose (Ludwigia hyssopifolia) in Thailand based on morphological characters and RAPD analysis

    Tantasawat PA, K Lunwongsa, T Linthaisong, P Wirikitgul, N Campatong, N Talpolkrung, A Tharapreuksapong, O Poolsawat, A Khairum, A Sorntip, C Kativat

    Phyton-International Journal of Experimental Botany, Vol.87, pp. 162-170, 2018, DOI:10.32604/phyton.2018.87.162

    Abstract Genetic diversity and relatedness of 17 water primrose (Ludwigia hyssopifolia) accessions in Thailand were estimated using morphological characters and random amplified polymorphic DNA (RAPD) markers. Eight morphological characters were diverse among the accessions. However, some accessions could not be distinguished from one another based on these morphological characters alone. Unweighted pair-group arithmetic average (UPGMA) analysis of these characters separated these 17 accessions into 2 major clusters. Among the 5 RAPD primers used, a total of 68 fragments (150 to 2000 bp) were amplified, showing a polymorphism percentage of 80%. The polymorphic information content (PIC) among accessions… More >

  • Open Access

    ARTICLE

    Utility of taxonomic unit and life form in the analysis of plant diversity patterns in a temperate meadow steppe, China

    Han DY1,2, YF Yang2

    Phyton-International Journal of Experimental Botany, Vol.87, pp. 113-122, 2018, DOI:10.32604/phyton.2018.87.113

    Abstract Rapid and precise assessment of biodiversity is a central issue in conservation biology and biodiversity science. Higher taxonomic units and life form-based morphospecies were utilised to assess plant diversity patterns at the habitat scale in temperate meadow steppe, Songnen Plain, China. Patch area, taxonomic composition (families and genera) and life form (based on Raunkiaer’s life forms, and stem and root growth forms) were recorded in five communities. Taxonomic unit-based hierarchical diversity indices (HDI) and life form-based hierarchical diversity indices (HLDI) were calculated. Twenty-six families, 67 genera, and 87 species were recorded in the five communities.… More >

  • Open Access

    ARTICLE

    Molecular differentiation of Xoconostle (Opuntia spp.) using AFLP molecular markers

    García-Zambrano EA1, MC Ojeda-Zacarías1, JG Gutiérrez-Soto1, SR Sinagawa-García1, A Gutiérrez-Díez1, J Martínez-de la Cerda1, JA Pedroza-Flores1, C Gallegos-Vázquez2, JI García-Zambrano3

    Phyton-International Journal of Experimental Botany, Vol.87, pp. 87-93, 2018, DOI:10.32604/phyton.2018.87.087

    Abstract The technologies based on molecular markers of DNA are the most advanced and possibly the most effective and accurate means to identify genetic variation. The objective of this study was to use molecular genetic markers namely AFLP as a tool for the molecular differentiation of 36 accessions of xoconostle collected in the Centro Regional Universitario Centro Norte of the Universidad Autónoma de Chapingo (CRUCEN-UACh.). DNA extraction was performed by the method of cellular ruptor using FastDNA® Kit, and quantification of purity and yield of DNA was carried out through the Nanodrop 2000. It was observed that… More >

  • Open Access

    ARTICLE

    Morphological diversity of wild and semi-wild chili populations of Tabasco and the north of Chiapas States, Mexico

    Gálvez Muñoz YA1, E Martínez Moreno2, S Ramírez Vera2, L Latournerie Moreno3, JM Lesher Gordillo1, G Castañón Nájera1*

    Phyton-International Journal of Experimental Botany, Vol.87, pp. 60-67, 2018, DOI:10.32604/phyton.2018.87.060

    Abstract The research was conducted with the aim to identify the variability in situ of wild and semi-wild morphotypes of Capsicum spp. that were found growing in different places of Tabasco and the north of Chiapas States. Morphotypes included “Amashito” (five types), “Pico de paloma” (two types), “Garbanzo”, “Ojo de sapo”, “Ojo de cangrejo”, “Colmillo de lagarto” and “Corazón de pollo”. Such characterization is important because there is an extensive variability of forms cultivated in the country, resulting from a wide range of agroecological diversity as well as diverse forms, colours, flavors and sizes that constitute a valuable… More >

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