Xinxin Liu^1,#, Yueyue Zhang^1,#, Rahat Sharif¹, Weiqin Mo², Zhenrong Li¹, Guiling Yang¹, Chao Song¹, Ting Ye^2,*, Changming Chen^1,*

Phyton-International Journal of Experimental Botany, Vol.94, No.6, pp. 1695-1709, 2025, DOI:10.32604/phyton.2025.063349 - 27 June 2025

Abstract The color difference of capsicum fruit is closely related to the type and content of pigment in the peel, which is mainly determined by anthocyanins, chlorophyll, and carotenoids. This study used green “CA59” and purple “Z81” pepper fruits as parents to create the F₂ generation. The fruit color of 466 F₂ population was identified, and the extreme individuals from this population were selected for Bulked Segregant Analysis (BSA) using resequencing. Genetic analysis revealed that a pair of genes controls the expression of the purple fruit trait in capsicum. Using functional annotation, expression analysis, and sequencing analysis… More >

Muhammad Imran Khan¹, Fahad Masoud Wattoo¹, Kamran Shehzad Bajwa^2,*, Zahid Akram¹, Sabahat Noor², Zaheer Abbas², Rashid Mehmood Rana¹, Muhammad Tahir Akram³, Shaukat Ali², Rai Muhammad Amir⁴, Ghulam Muhammad Ali⁵

Phyton-International Journal of Experimental Botany, Vol.94, No.4, pp. 1299-1318, 2025, DOI:10.32604/phyton.2025.062323 - 30 April 2025

Abstract The agricultural sector is notably affected by climate change, especially soybeans, which may face diminished yields because of severe water shortages. The evaluation of germplasm at morphological and molecular levels is an important pre-breeding step for crop improvement. This study employed 10 simple sequence repeat (SSR) markers to examine 60 soybean genotypes in the quest for drought-resistant lines during 2022–23. The results of the screening experiment (PEG-6000) revealed that the soybean genotypes SPS13, SPS195, PGRB83, and 39982 exhibited significant correlations in growth parameters. The results of molecular characterization indicated that five out of ten molecular… More >

Sally Negm¹, Badwy Mohdly², Motrih Al-Mutiry³, Wael Shehata⁴, Karima Ahmed⁵, Mohamed Abou-Zeid^2,*, Rana Elessawy⁶, Ashgan Abdel-Azim⁵, Amr Abdel-Fattah², Amani Omar Abuzaid⁷, Enas A. Almanzalawi⁷, Tahani M. Alqahtani⁷, Shouaa A. Alrobaish⁸, Diaa Abd El Moneim⁹, Ahmed M. Abbas^10,11, Mohammed O. Alshaharni¹⁰, Huda Alghamdi¹⁰, Shaimaa G. Salama¹², Kairy Amer⁵

Phyton-International Journal of Experimental Botany, Vol.94, No.2, pp. 347-377, 2025, DOI:10.32604/phyton.2025.057448 - 06 March 2025

Abstract Barley (Hordeum vulgare L.) is a significant global crop that thrives in various climatic and drought-stress conditions. Furthermore, increased drought intervals and more significant weather variability resulting from climate change can affect the severity of plant diseases. Therefore, two primary objectives of integrated disease management regarding climate change are identifying cultivars resistant to foliar diseases and understanding disease progression under abiotic stress. In the current study, we assessed the quantitative foliar disease resistance of 17 commercial barley cultivars under both normal and water stress conditions over two growing seasons (from 2020/21 to 2021/22). The findings demonstrated… More >

Esraa E. Shalan¹, Said S. Soliman¹, Ahmed A. Mahmoud¹, Jameel M. Al-Khayri^2,*, Salha M. ALshamrani³, Fatmah A. Safhi⁴, Areej S. Jalal⁴, Diaa Abd El-Moneim⁵, Abdallah A. Hassanin^1,*

Phyton-International Journal of Experimental Botany, Vol.92, No.7, pp. 2183-2196, 2023, DOI:10.32604/phyton.2023.028537 - 29 May 2023

Abstract Determination of the somaclonal variation of in vitro-propagated plants is crucial to determine the appropriate micropropagation protocol and growth regulators for commercial scale multiplication. In this research, nine multiplication media (MM) augmented with different concentrations of 6-benzyl adenine (BA), Kinetin (Kin), and Thidiazuron (TDZ), Three rooting media (RM) supplemented with three levels of α-naphthalene acetic acid (NAA) and three types of soil mixtures (v/v); Coco peat/Vermiculite/Sand (CVS), Peat moss/Perlite/Sand (PPS) and Peat moss/Perlite (PP) were used in the micropropagation protocol of daylily plants. MM2 showed the maximum shoot length and the number of leaves, while MM9… More >

Jameel M. Al-Khayri^1,*, Salha M. Alshamrani², Adel A. Rezk¹, Wael F. Shehata¹, Mustafa I. Almaghasla³, Tarek A. Shalaby^3,4, Ahmed M. Saad⁵, Fatmah A. Safhi⁶, Muhammad N. Sattar⁷, Arafat A. Abdel Latef⁸, Mahmoud Z. Sitohy⁵, Abdallah A. Hassanin^9,*

Phyton-International Journal of Experimental Botany, Vol.92, No.5, pp. 1493-1512, 2023, DOI:10.32604/phyton.2023.027375 - 09 March 2023

Abstract Appropriate knowledge of the parental cultivars is a pre-requisite for a successful breeding program. This study characterized fruit yield, quality attributes, and molecular variations of ten tomato cultivars during three consecutive generations under greenhouse conditions. Peto 86, Castle Rock, and Red Star cultivars showed the highest fruit yield (kg/plant), total phenolic compounds (TPC), and sap acidity. Principal component analysis categorized the evaluated fruit yield into three groups based on their quality attributes. A robust positive correlation appeared among traits inside each group. A positive correlation was likewise noticed between the first and the second groups.… More >

Maria Babar¹, Siddra Ijaz^1,*, Imran Ul Haq², Muhammad Sarwar Khan¹

Phyton-International Journal of Experimental Botany, Vol.92, No.4, pp. 1289-1300, 2023, DOI:10.32604/phyton.2023.026469 - 06 January 2023

Abstract We developed a molecular marker for MAS of mungbean resistant varieties against CLS from the consensus sequence (MB-CLsRG) of identified RGAs (MB-ClsRCaG1 and MB-ClsRCaG2). The MB-CLsRG sequence-specific primer pair was used to screen Cercospora leaf spot (CLS) resistant varieties of mungbean in genomic analysis that showed congruency with phenotypic screening. Validation of molecular marker linkage with CLS resistance was performed using rtPCR in transcriptomic analysis. The sequenced PCR products showed 100% homology with MB-CLsRG sequence and putative disease resistance proteins that confirmed the linkage of molecular marker with CLS resistance in mungbean. The antifungal potential of… More >

Adel A. Rezk^1,2, Mohamed M. El-Malky³, Hossam S. El-Beltagi^1,4,*, Mohammed Al-daej¹, Kotb A. Attia^5,6

Phyton-International Journal of Experimental Botany, Vol.92, No.3, pp. 725-746, 2023, DOI:10.32604/phyton.2022.024645 - 29 November 2022

Abstract Monogenic lines, which carried 23 genes for blast resistance were tested and used donors to transfer resistance genes by crossing method. The results under blast nursery revealed that 9 genes from 23 genes were susceptible to highly susceptible under the three locations (Sakha, Gemmeza, and Zarzoura in Egypt); Pia, Pik, Pik-p, Piz-t, Pita, Pi b, Pi, Pi 19 and Pi 20. While, the genes Pii, Pik-s, Pik-h, Pi z, Piz-5, Pi sh, Pi 3, Pi 1, Pi 5, Pi 7, Pi 9, Pi 12, Pikm and Pita-2 were highly resistant at the same locations. Clustering analysis confirmed the results, which divided into two groups; the first one included all the susceptible genes,… More >

Sheila Jazmín Reyes-Zambrano^1,*, Carlos Alberto Lecona-Guzmán¹, Federico Antonio Gutiérrez-Miceli¹, Víctor Manuel Ruiz-Valdiviezo¹, Arely Anayansi Vargas-Díaz²

Phyton-International Journal of Experimental Botany, Vol.90, No.6, pp. 1727-1739, 2021, DOI:10.32604/phyton.2021.016171 - 28 June 2021

Abstract Agave americana L. callus were exposed to different concentrations of ethyl methanesulphonate (EMS) 0, 15, 30, 45 and 60 mM and to different times of exposure (2 and 4 h). The viability and capacity of shoot formation were shown to be affected when the callus were exposed to high concentrations (30–60 mM). Only the callus exposed to 15 mM EMS presented shoot formation; the exposure time of two hours produced the largest quantity of shoots regenerated per callus (21 shoots/callus). In order to generate somaclonal variants resistant to Fusarium oxysporum, a selection pressure was applied through of… More >

THARANGANI WELEGAMA¹, MOHD Y. RAFII^1,2,*, KHAIRULMAZMI AHMAD^1,3, SHAIRUL I. RAMLEE^1,2, YUSUFF OLADOSU¹

BIOCELL, Vol.45, No.4, pp. 1069-1079, 2021, DOI:10.32604/biocell.2021.014354 - 22 April 2021

Abstract Tomato (Solanum lycopersicum L.) belonging to the family Solanaceae is the second most consumed and cultivated vegetable globally. Since the ancient time of its domestication, thousands of cultivated tomato varieties have been developed targeting an array of aspects. Among which breeding for yield and yield-related traits are mostly focused. Cultivated tomato is extremely genetically poor and hence it is a victim for several biotic and abiotic stresses. Among the biotic stresses, the impact of viral diseases is critical all over tomato cultivating areas. Improvement of tomato still largely rely on conventional methods worldwide while molecular approaches, More >

Riaz Ahmad¹, Muhammad Akbar Anjum^1,*, Safina Naz¹, Rashad Mukhtar Balal²

Phyton-International Journal of Experimental Botany, Vol.90, No.1, pp. 17-34, 2021, DOI:10.32604/phyton.2020.011680 - 20 November 2020

Abstract Selection and use of molecular markers for evaluation of DNA polymorphism in plants are couple of the most important approaches in the field of molecular genetics. The assessment of genetic diversity using morphological markers is not sufficient due to little differentiating traits among the species, genera or their individuals. Morphological markers are not only highly influenced by environmental factors but skilled assessment is also prerequisite to find the variations in plant genetic resources. Therefore, molecular markers are considered as efficient tools for detailed DNA based characterization of fruit crops. Molecular markers provide new directions to More >