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  • Open Access

    REVIEW

    From Markers to Genome Based Breeding in Horticultural Crops: An Overview

    Riaz Ahmad1, Muhammad Akbar Anjum1,*, Rashad Mukhtar Balal2

    Phyton-International Journal of Experimental Botany, Vol.89, No.2, pp. 183-204, 2020, DOI:10.32604/phyton.2020.08537

    Abstract Molecular markers, genome sequencing and genome editing are considered as efficient tools to accomplish demands of plant breeders for crop improvement programs. Morphological and biochemical markers have not been extensively used as these are greatly influenced by environmental factors. Different molecular markers and sequencing techniques are routinely used in evaluation of genetic diversity and evolutionary relationship, accurate classification or taxonomy, characterization of germplasm, identification of hybrids and phylogenetic studies. Desired and undesired traits controlled by genes can be identified through different molecular markers technology all over the globe. These molecular markers are well established and have successfully been used for… More >

  • Open Access

    ARTICLE

    The Chloroplast Genome of Cerasus Campanulata Diverges from Other Prunoideae Genomes

    Yuhao Weng1, Liming Zhu2, Yan Ma3, Hao Su1, Lu Lu1, Pengkai Wang1, Jinhui Chen1, Asif Ali1, Renhua Zheng4,*, Jisen Shi1,*

    Phyton-International Journal of Experimental Botany, Vol.89, No.2, pp. 375-384, 2020, DOI:10.32604/phyton.2020.08831

    Abstract Cerasus Campanulata is one of several species belonging to the Prunoideae focke, a subfamily of the flowering plant Rosaceae. We investigated the details of its chloroplast genome which may reveal its genus independent of morphological determination. Here, we determined the complete chloroplast (cp) genome sequence of C. campanulata and performed sequence analysis to reveal the presence of 18 forward repeats, 20 palindrome repeats, 2 complement repeats, 4 reverse repeats and 93 simple sequence repeats (SSRs). We additionally performed a comparative study of C. campanulata and seven other Prunoideae focke species. Then, maximum parsimony (MP) and maximum likelihood (ML) phylogenetic analyses… More >

  • Open Access

    ARTICLE

    Genome-Wide Identification of the F-box Gene Family and Expression Analysis under Drought and Salt Stress in Barley

    Lantian Zhang, Siyi Wang, Yuyu Chen, Mengyuan Dong, Yunxia Fang, Xian Zhang, Tao Tong, Ziling Zhang, Junjun Zheng, Dawei Xue*, Xiaoqin Zhang*

    Phyton-International Journal of Experimental Botany, Vol.89, No.2, pp. 229-251, 2020, DOI:10.32604/phyton.2020.10022

    Abstract The F-box protein-encoding gene family plays an essential role in plant stress resistance. In present study, 126 non-redundant F-box genes were identified in barley (Hordeum vulgare L., Hv). The corresponding proteins contained 165– 887 amino acid residues and all were amphiphilic, except 5 proteins. Phylogenetic analysis of F-box protein sequences in barley and stress-related F-box protein sequences in wheat and Arabidopsis thaliana (At) was used to classify barley F-box genes are divided into 9 subfamilies (A–I). A structure-based sequence alignment demonstrated that F-box proteins were highly conserved with a total of 10 conserved motifs. In total, 124 F-box genes were… More >

  • Open Access

    ARTICLE

    Genetic analysis for quantitative traits in bread wheat exposed to irrigated and drought stress conditions

    Ataei R1, M Gholamhoseini1, M Kamalizadeh2

    Phyton-International Journal of Experimental Botany, Vol.86, pp. 228-235, 2017, DOI:10.32604/phyton.2017.86.228

    Abstract Understanding the genetic control of traits associated with yield helps breeders to utilize their germplasm in a more efficient and consistent manner and to make good choices in breeding programs. The current study was carried out to study the genetic control of some quantitative traits in bread wheat (Triticum aestivum L.) and to examine plant responses under full irrigation and drought stress conditions. For this purpose, six generations derived from a cross between two lines (Bezostaya as tolerant parent and 518 as a susceptible parent) were evaluated for grain yield (GY), plant height (PH), peduncle (PL) and spike (SL) lengths,… More >

  • Open Access

    ARTICLE

    Chitinase, chitosanase, and antifungal activities from thermophilic streptomycetes isolated from compost

    González-Franco AC1, L Robles-Hernández1, JL Strap2

    Phyton-International Journal of Experimental Botany, Vol.86, pp. 14-27, 2017, DOI:10.32604/phyton.2017.86.014

    Abstract The Streptomyces genus comprises a large and diverse group of bacteria, many of which are commercially exploited for the production of antibiotics and lytic enzymes. The thermophilic species are less studied than the predominant mesophilic species. However, the first ones are a potential source of thermostable bioactive products and enzymes with novel properties. In this study, two selected thermophilic streptomycetes were identified and their chitinolytic activities were evaluated. The identification of these two isolates was performed by microscopic morphology, partial 16S rDNA sequences, and its phylogenetic analysis. To study the chitinolytic activities of these isolates, the effects of colloidal chitin… More >

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