Munir Ozturk^1,*, Volkan Altay², Mahir Kucuk³, Ibrahim Ertuğrul Yalçın⁴

Phyton-International Journal of Experimental Botany, Vol.88, No.3, pp. 223-238, 2019, DOI:10.32604/phyton.2019.07446

Abstract This study presents a case study on the heavy metal analysis of soil and plant samples around the Murgul copper mine, one of the first and most important mining areas in Turkey. An attempt has been made to investigate the status of trace elements like Al³⁺, Fe²⁺, Cu²⁺, Zn²⁺, Pb²⁺, Ni²⁺, Co²⁺ and Cd²⁺ in soils and plants. The sampling localities were taken from 500 m, 600 m, and 1000 m altitudes around the factory and at 1400 m in the forest zone. The aboveground parts and foliage ash of Silene compacta, Tussilago farfara, Smilax excelsa, Rhododendron ponticum, R. luteum,… More >

A. A. Abdulrazeg¹, J. Noorzaei^1,2, P. Khanehzaei¹, M. S. Jaafar¹, T. A. Mohammed¹

CMES-Computer Modeling in Engineering & Sciences, Vol.68, No.3, pp. 239-268, 2010, DOI:10.3970/cmes.2010.068.239

Abstract Development of temperature rise in massive concrete structure such as a roller compacted concrete dam is attributed to hydration of concrete and environmental boundary conditions. These thermal changes in the material affect the elastic, creep properties of the material, and in turn, the stress fields within the structure. Therefore, the effects of temperature on the properties of RCC materials( elastic, creep) has to be taken into account in order to determine the risk of the thermally induced cracking in these dams. In the present work an attempt has been made to consider the effect of temperature on the elastic and… More >

Mirza Hasanuzzaman^1,*, Aditya Banerjee², M. H. M. Borhannuddin Bhuyan^3,4, Aryadeep Roychoudhury^2,*, Jubayer Al Mahmud⁵ and Masayuki Fujita³

Phyton-International Journal of Experimental Botany, Vol.88, No.3, pp. 185-221, 2019, DOI:10.32604/phyton.2019.07559

Abstract In the era of climate change, abiotic stresses (e.g., salinity, drought, extreme temperature, flooding, metal/metalloid(s), UV radiation, ozone, etc.) are considered as one of the most complex environmental constraints that restricts crop production worldwide. Introduction of stress-tolerant crop cultivars is the most auspicious way of surviving this constraint, and to produce these types of tolerant crops. Several bioengineering mechanisms involved in stress signaling are being adopted in this regard. One example of this kind of manipulation is the osmotic adjustment. The quarternary ammonium compound glycinebetaine (GB), also originally referred to as betaine is a methylated glycine derivative. Among the betaines,… More >

Chikit Au¹, Yiyu Cai², Jianmin Zheng³, Tony Woo⁴

CMES-Computer Modeling in Engineering & Sciences, Vol.68, No.3, pp. 221-238, 2010, DOI:10.3970/cmes.2010.068.221

Abstract A protein model (such as a ribbon model) can be created from the atomic coordinates in the protein data base files. These coordinates are obtained by X-ray crystallography or NMR spectroscopy with the protein arbitrarily oriented. As such, identifying or comparing a novel structure with a known item using protein model in the protein data base can be a timely process since a large number of transformations may be involved. The identification efficiency will be improved if the protein models are uniformly oriented. This paper presents an approach to orient a protein model to generate the characteristic views with minimum… More >

Ramzi Bchir^1,2,*, Aslam Sami Djellouli¹, Nadia Zitouna³, Didier Aurelle⁴, Gerard Pergent², Christine Pergent-Martini² and Habib Langar¹

Phyton-International Journal of Experimental Botany, Vol.88, No.2, pp. 171-184, 2019, DOI:10.32604/phyton.2019.05261

Abstract Specimens of Cymodocea (Viridiplantae, Magnoliophyta) collected on the Tunisian coasts showed a particular morphological and anatomical difference with the classical descriptions of Cymodocea nodosa (Ucria) Asch. the only species of this genus reported in the Mediterranean Sea. In order to precise the taxonomic identity of the new specimens we aimed in this work (i) to verify the identity of the new forms, (ii) to evaluate the genetic diversity of the population, (iii) to test the validity of the existing identification keys of the Tunisian Cymodocea populations. Four stations located in two regions of the Tunisian coasts were sampled. Leaf morphological… More >

A. Cruz-Estrada^1,2, E. Ruiz-Sánchez², I.L. Medina Baizabal¹, E. Balam-Uc¹ and M. Gamboa-Angulo^1,*

Phyton-International Journal of Experimental Botany, Vol.88, No.2, pp. 161-170, 2019, DOI:10.32604/phyton.2019.05809

Abstract The development of plant-derived products to control Bemisia tabaci Genn. (Hemiptera: Aleyrodidae) is an urgent need for production of horticultural crops. Plant extracts and essential oils of several species of the genus Eugenia (Myrtaceae) have shown insecticidal activity. In southern Mexico, leaf extracts from Eugenia winzerlingii showed nematicidal effect but its insecticidal properties have not been explored. Therefore, the objective of this study was to evaluate the insecticidal effect of aqueous and organic extracts from E. winzerlingii leaves on B. tabaci egg, nymph and adult stages, and else to explore its nursery propagation. Then, extracts of this species were obtained… More >

Zahra HOSSEININIA¹, Sara SOLTANIAN², Naser MAHDAVI-SHAHRI³, Hesam DEHGHANI^1,4

BIOCELL, Vol.43, No.3, pp. 145-154, 2019, DOI:10.32604/biocell.2019.06468

Abstract Maintenance of pluripotency depends to diverse regulatory factors. Studies in embryonic stem cells (ESCs) have indicated that large intergenic non-coding RNAs (lincRNAs) are involved in the regulatory network of pluripotency. However, the presence and function of pluripotency-associated lincRNAs in cancer cells with pluripotency features are unknown. In this study, we used embryonal carcinoma (EC) P19 cell lines to investigate the expression level of Halr1 in pluripotency and retinoic acid (RA)-induced differentiated states. Down-regulation of pluripotency associated factors such as OCT4, NANOG, SSEA1 and alkaline phosphatase at transcript and protein levels were used to confirm the differentiated status of P19 cells.… More >

Maryam Monazzah¹, Sattar Tahmasebi Enferadi^1,*, Zohre Rabiei¹ and Alessandro Mattiello²

Phyton-International Journal of Experimental Botany, Vol.88, No.2, pp. 149-159, 2019, DOI:10.32604/phyton.2019.05053

Abstract Helianthus annuus L. as an oil seed crop is widely grown throughout the world. One of the most destructive diseases of sunflower is stem rot caused by Sclerotinia sclerotiorum. Oxalic acid is the major virulence factor of this necrotrophic pathogen. It is important to further investigate plant responses to this non-specific toxin. Therefore, in the present study, we compared the patterns of total soluble proteins and xylem morphology of partially resistant and susceptible sunflower lines after treatment with Sclerotinia culture filtrate. The basal stems of both lines were treated with 40 mM oxalic acid (pH 3.7) of fungus culture filtrate… More >

C. Tapp¹, W. Hansel, C. Mittelstedt, W. Becker²

CMES-Computer Modeling in Engineering & Sciences, Vol.5, No.6, pp. 563-574, 2004, DOI:10.3970/cmes.2004.005.563

Abstract A heuristic algorithm for the weight minimization of sandwich plates is presented. The method is based on a preexisting algorithm for the layerwise topology optimization of symmetric laminates under in-plane loads. The presented algorithm uses structural analyses based on finite elements and explicitly accounts for the special sandwich situation. During the optimization procedure the algorithm adds or subtracts material from the layers of the face sheets and the core of the sandwich plate in regions of high or low stresses respectively. The orientation angles of the layers of the sandwich facings are not varied inorder to alloweasy manufacturing. Several variantsofthe… More >

M. Y. Ovando-Domínguez¹, M. C. Luján-Hidalgo¹, D. González-Mendoza², A. A. Vargas-Díaz³, N. Ruiz-Lau^1,4, F. A. Gutiérrez-Miceli¹, C. A. Lecona-Guzmán^1,*

Phyton-International Journal of Experimental Botany, Vol.88, No.2, pp. 139-147, 2019, DOI:10.32604/phyton.2019.06546

Abstract Callus cultures of Annona muricata and Annona purpurea were induced in Murashige and Skoog (MS) medium supplemented with different concentrations of 1-naphthylacetic acid (NAA), 6-benzyladenine (BA) and 2,4-dichlorophenoxyacetic acid (2,4-D) utilized hypocotyls with explant. The highest percentage of callus formation was the treatment supplemented with 3 mg L^-1 NAA for A. muricata (100%) while for A. purpurea in lower percentage (75%). BA stimulated the formation of shoots in all the evaluated concentrations, being the concentration of 2 mg L^-1 the one that induced the greater formation of shoots for A. muricata (23 shoots/explant) and A. purpurea (28 shoots/explant). The content… More >