LEI JIANG^1,2,3,#, SHUAI LI^1,#, XIZI JIANG¹, TONG JIANG^1,2,3,*

BIOCELL, Vol.45, No.6, pp. 1695-1702, 2021, DOI:10.32604/biocell.2021.015250 - 01 September 2021

Abstract It was rarely reported about strawberry vein banding virus (SVBV) genome sequence in China and most countries worldwide. In this work, we determined the complete genome sequences of two SVBV isolates in China, designated SVBV-AH and SVBV-BJ, that were obtained from naturally infected strawberry samples from Anhui province and Beijing city of China, respectively. The complete genomes of SVBV-AH and SVBV-BJ were 7,862 nucleotides (nts) and 7,863 nts long, respectively, and both constituted with seven genes typical of the caulimoviruses. Alignment of complete nucleotide sequences showed that SVBV-AH and SVBV-BJ shared a significant nucleotide sequence… More >

HSIUYING WANG^1,2,*

BIOCELL, Vol.45, No.3, pp. 547-561, 2021, DOI:10.32604/biocell.2021.014343 - 03 March 2021

Abstract Amyotrophic lateral sclerosis (ALS), also called Lou Gehrig’s disease, is an irreversible disease that is caused by the degeneration and death of motor neurons. Approximately 5–10% of cases are familial ALS (fALS), and the other cases are sporadic ALS (sALS). Gene mutations have been identified both in fALS and sALS patients. In this study, we discuss the four ALS-related genes, C9orf72, SOD1, FUS, and TARDBP, and review the microRNAs (miRNAs) that are associated with ALS and other neurological disorders from the literature. A phylogenetic analysis is used to explore potential miRNAs that can be taken More >

Zhenzhong Jiang¹, Peng Jiao¹, Zhuo Qi¹, He Zhao², Jing Qu², Siyan Liu¹, Dan Yao¹, Piwu Wang², Shuyan Guan^1,*, Yiyong Ma^2,*

Phyton-International Journal of Experimental Botany, Vol.90, No.2, pp. 449-459, 2021, DOI:10.32604/phyton.2021.013247 - 07 February 2021

Abstract The concept of gene-function-genetic trait was introduced to explore the effects of early flowering on the growth and development of maize at the jointing stage and to obtain early flowering mutants using ethyl methanesulfonate mutagenesis. First, we studied gene expression, phytohormones, and lignin content to explore the physiological peculiarities of the early flowering mutant. Then we analyzed the genetic features of the mutants during the jointing stage by measuring physiological and biochemical indices of drought tolerance. The results showed that the photosynthetic rate of the mutant was significantly higher than that of the control and More >

Yingting Zhang^1,2,3, Junjie Yang^1,2,3, Zhenhao Guo^1,2,3, Jiaxing Mo^1,2,3, Jiebing Cui^1,2,3, Hailiang Hu^1,2,3, Jin Xu^1,2,3,*

Phyton-International Journal of Experimental Botany, Vol.89, No.4, pp. 957-986, 2020, DOI:10.32604/phyton.2020.011211 - 09 November 2020

Abstract Cryptomeria fortunei (Chinese cedar) is a highly adaptable woody species and one of the main forest plantation trees in subtropical high-altitude areas in China. However, there are few studies on its chloroplast (cp) genome. In this study, the complete cp genome of C. fortunei was sequenced and evaluated via comparative analyses with those of related species (formerly the Taxodiaceae) in Cupressaceae. The C. fortunei cp genome was 131,580 bp in length, and the GC content of the whole genome was 35.38%. It lost one relevant large inverted repeat and contained 114 unique genes, including 82 protein-coding genes, 28… More >

Sen Wang¹, Fei Zheng¹, Meijing Zhang¹, Jun Tu², Yanping Chen^1,3, Jianhua Yuan^1,3, Qingchang Meng^1,*

Phyton-International Journal of Experimental Botany, Vol.89, No.4, pp. 861-871, 2020, DOI:10.32604/phyton.2020.011762 - 09 November 2020

Abstract Endosperm mutants are critical to the studies on both starch synthesis and metabolism and genetic improvement of starch quality in maize. In the present study, a novel maize endosperm mutant A0178 of natural variation was used as the experimental material and identified and then characterized. Through phenotypic identification, genetic analysis, main ingredients measurement and embryo rescue, development of genetic mapping population from A0178, the endosperm mutant gene was located. The results showed that the mutant exhibited extremely low germination ability as attributed to the inhibited embryo development, and amounts of sugars were accumulated in the… More >

Riaz Ahmad¹, Muhammad Akbar Anjum^1,*, Rashad Mukhtar Balal²

Phyton-International Journal of Experimental Botany, Vol.89, No.2, pp. 183-204, 2020, DOI:10.32604/phyton.2020.08537 - 22 April 2020

Abstract Molecular markers, genome sequencing and genome editing are considered as efficient tools to accomplish demands of plant breeders for crop improvement programs. Morphological and biochemical markers have not been extensively used as these are greatly influenced by environmental factors. Different molecular markers and sequencing techniques are routinely used in evaluation of genetic diversity and evolutionary relationship, accurate classification or taxonomy, characterization of germplasm, identification of hybrids and phylogenetic studies. Desired and undesired traits controlled by genes can be identified through different molecular markers technology all over the globe. These molecular markers are well established and… More >

Yuhao Weng¹, Liming Zhu², Yan Ma³, Hao Su¹, Lu Lu¹, Pengkai Wang¹, Jinhui Chen¹, Asif Ali¹, Renhua Zheng^4,*, Jisen Shi^1,*

Phyton-International Journal of Experimental Botany, Vol.89, No.2, pp. 375-384, 2020, DOI:10.32604/phyton.2020.08831 - 22 April 2020

Abstract Cerasus Campanulata is one of several species belonging to the Prunoideae focke, a subfamily of the flowering plant Rosaceae. We investigated the details of its chloroplast genome which may reveal its genus independent of morphological determination. Here, we determined the complete chloroplast (cp) genome sequence of C. campanulata and performed sequence analysis to reveal the presence of 18 forward repeats, 20 palindrome repeats, 2 complement repeats, 4 reverse repeats and 93 simple sequence repeats (SSRs). We additionally performed a comparative study of C. campanulata and seven other Prunoideae focke species. Then, maximum parsimony (MP) and maximum likelihood (ML) More >

Lantian Zhang, Siyi Wang, Yuyu Chen, Mengyuan Dong, Yunxia Fang, Xian Zhang, Tao Tong, Ziling Zhang, Junjun Zheng, Dawei Xue^*, Xiaoqin Zhang^*

Phyton-International Journal of Experimental Botany, Vol.89, No.2, pp. 229-251, 2020, DOI:10.32604/phyton.2020.10022 - 22 April 2020

Abstract The F-box protein-encoding gene family plays an essential role in plant stress resistance. In present study, 126 non-redundant F-box genes were identified in barley (Hordeum vulgare L., Hv). The corresponding proteins contained 165– 887 amino acid residues and all were amphiphilic, except 5 proteins. Phylogenetic analysis of F-box protein sequences in barley and stress-related F-box protein sequences in wheat and Arabidopsis thaliana (At) was used to classify barley F-box genes are divided into 9 subfamilies (A–I). A structure-based sequence alignment demonstrated that F-box proteins were highly conserved with a total of 10 conserved motifs. In total, 124 F-box genes were… More >

Ataei R¹, M Gholamhoseini¹, M Kamalizadeh²

Phyton-International Journal of Experimental Botany, Vol.86, pp. 228-235, 2017, DOI:10.32604/phyton.2017.86.228

Abstract Understanding the genetic control of traits associated with yield helps breeders to utilize their germplasm in a more efficient and consistent manner and to make good choices in breeding programs. The current study was carried out to study the genetic control of some quantitative traits in bread wheat (Triticum aestivum L.) and to examine plant responses under full irrigation and drought stress conditions. For this purpose, six generations derived from a cross between two lines (Bezostaya as tolerant parent and 518 as a susceptible parent) were evaluated for grain yield (GY), plant height (PH), peduncle (PL)… More >

González-Franco AC¹, L Robles-Hernández¹, JL Strap²

Phyton-International Journal of Experimental Botany, Vol.86, pp. 14-27, 2017, DOI:10.32604/phyton.2017.86.014

Abstract The Streptomyces genus comprises a large and diverse group of bacteria, many of which are commercially exploited for the production of antibiotics and lytic enzymes. The thermophilic species are less studied than the predominant mesophilic species. However, the first ones are a potential source of thermostable bioactive products and enzymes with novel properties. In this study, two selected thermophilic streptomycetes were identified and their chitinolytic activities were evaluated. The identification of these two isolates was performed by microscopic morphology, partial 16S rDNA sequences, and its phylogenetic analysis. To study the chitinolytic activities of these isolates, the… More >