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  • Open Access

    ARTICLE

    Survey of Barley Sodium Transporter HvHKT1;1 Variants and Their Functional Analysis

    Shahin Imran1,2, Maki Katsuhara1,*

    Phyton-International Journal of Experimental Botany, Vol.94, No.11, pp. 3653-3665, 2025, DOI:10.32604/phyton.2025.073959 - 01 December 2025

    Abstract Barley (Hordeum vulgare L.) employs the Na+ transporter HvHKT1;1, which is an N+-selective transporter. This study characterized the full-length HvHKT1;1 (HvHKT1;1-FL) and three mRNA variants (HvHKT1;1-V1, -V2, and -V3), which encode polypeptides of 64.7, 54.0, 40.5, and 32.9 kDa, respectively. Tissue-specific expression profiling revealed that HvHKT1;1-FL is the most abundant transcript across leaf, sheath, and root tissues under normal conditions, with the highest expression in leaves. Under 150 mM NaCl stress, HvHKT1;1-FL and its variants showed a dynamic, time-dependent expression pattern, with peak leaf expression at 2 h, sheath expression at 12 h, and root expression at 2 h, suggesting their… More >

  • Open Access

    ARTICLE

    Large Language Model in Healthcare for the Prediction of Genetic Variants from Unstructured Text Medicine Data Using Natural Language Processing

    Noor Ayesha1, Muhammad Mujahid2, Abeer Rashad Mirdad2, Faten S. Alamri3,*, Amjad R. Khan2

    CMC-Computers, Materials & Continua, Vol.84, No.1, pp. 1883-1899, 2025, DOI:10.32604/cmc.2025.063560 - 09 June 2025

    Abstract Large language models (LLMs) and natural language processing (NLP) have significant promise to improve efficiency and refine healthcare decision-making and clinical results. Numerous domains, including healthcare, are rapidly adopting LLMs for the classification of biomedical textual data in medical research. The LLM can derive insights from intricate, extensive, unstructured training data. Variants need to be accurately identified and classified to advance genetic research, provide individualized treatment, and assist physicians in making better choices. However, the sophisticated and perplexing language of medical reports is often beyond the capabilities of the devices we now utilize. Such an… More >

  • Open Access

    REVIEW

    Variants and Molecular Mechanism of NOTCH1 in Congenital Heart Disease

    Hongqun Xiang1, Jian Zhuang2,3, Luoning Bao4,5, Yan Shi2,3,*

    Congenital Heart Disease, Vol.20, No.2, pp. 245-263, 2025, DOI:10.32604/chd.2025.064366 - 30 April 2025

    Abstract Congenital heart disease (CHD) is the most common birth defect, with 34% of cases attributed to genetic variants. NOTCH1, a multi-domain transmembrane protein, regulates heart development by controlling the differentiation and migration of myocardial mesoderm cells, and different variants are present in different types of CHD. In this review, we aim to provide a detailed description of NOTCH1 structural domains and their functions, highlighting NOTCH1 variants in CHD and the molecular mechanisms through which they contribute to CHD occurrence. NOTCH1 has two main domains, the NOTCH extracellular domain (NECD) and the NOTCH intracellular domain… More >

  • Open Access

    REVIEW

    Stochastic Fractal Search: A Decade Comprehensive Review on Its Theory, Variants, and Applications

    Mohammed A. El-Shorbagy1, Anas Bouaouda2,*, Laith Abualigah3,4, Fatma A. Hashim5,6

    CMES-Computer Modeling in Engineering & Sciences, Vol.142, No.3, pp. 2339-2404, 2025, DOI:10.32604/cmes.2025.061028 - 03 March 2025

    Abstract With the rapid advancements in technology and science, optimization theory and algorithms have become increasingly important. A wide range of real-world problems is classified as optimization challenges, and meta-heuristic algorithms have shown remarkable effectiveness in solving these challenges across diverse domains, such as machine learning, process control, and engineering design, showcasing their capability to address complex optimization problems. The Stochastic Fractal Search (SFS) algorithm is one of the most popular meta-heuristic optimization methods inspired by the fractal growth patterns of natural materials. Since its introduction by Hamid Salimi in 2015, SFS has garnered significant attention… More >

  • Open Access

    REVIEW

    A Review of the Applications of Nanofluids and Related Hybrid Variants in Flat Tube Car Radiators

    Saeed Dinarvand*, Amirmohammad Abbasi, Sogol Gharsi

    FDMP-Fluid Dynamics & Materials Processing, Vol.21, No.1, pp. 37-60, 2025, DOI:10.32604/fdmp.2024.057545 - 24 January 2025

    Abstract The present review explores the promising role of nanofluids and related hybrid variants in enhancing the efficiency of flat tube car radiators. As vehicles become more advanced and demand better thermal performance, traditional coolants are starting to fall short. Nanofluids, which involve tiny nanoparticles dispersed into standard cooling liquids, offer a new solution by significantly improving heat transfer capabilities. The article categorizes the different types of nanofluids (ranging from those based on metals and metal oxides to carbon materials and hybrid combinations) and examines their effects on the improvement of radiator performance. General consensus More >

  • Open Access

    ARTICLE

    Genetic signatures of ERCC1 and ERCC2 expression, along with SNPs variants, unveil favorable prognosis in SCLC patients undergoing platinum-based chemotherapy

    ENRICO CALIMAN1,2, SARA FANCELLI1,2, FEDERICO SCOLARI3, ADRIANO PASQUI4, CLARA MANNESCHI4, DANIELE LAVACCHI1, FRANCESCA MAZZONI4, FRANCESCA GENSINI5, VALERIA PASINI6, CAMILLA EVA COMIN2,7, LUCA VOLTOLINI2,8, SERENA PILLOZZI1,2,*, LORENZO ANTONUZZO1,2,4

    Oncology Research, Vol.33, No.1, pp. 45-55, 2025, DOI:10.32604/or.2024.050161 - 20 December 2024

    Abstract Background: Platinum chemotherapy (CT) remains the backbone of systemic therapy for patients with small-cell lung cancer (SCLC). The nucleotide excision repair (NER) pathway plays a central role in the repair of the DNA damage exerted by platinum agents. Alteration in this repair mechanism may affect patients’ survival. Materials and Methods: We conducted a retrospective analysis of data from 38 patients with extensive disease (ED)-SCLC who underwent platinum-CT at the Clinical Oncology Unit, Careggi University Hospital, Florence (Italy), from 2015 to 2020. mRNA expression analysis and single nucleotide polymorphism (SNP) characterization of three NER pathway genes—namely ERCC1, ERCC2,… More >

  • Open Access

    ARTICLE

    Efficient and Cost-Effective Vehicle Detection in Foggy Weather for Edge/Fog-Enabled Traffic Surveillance and Collision Avoidance Systems

    Naeem Raza1, Muhammad Asif Habib1, Mudassar Ahmad1, Qaisar Abbas2,*, Mutlaq B. Aldajani2, Muhammad Ahsan Latif3

    CMC-Computers, Materials & Continua, Vol.81, No.1, pp. 911-931, 2024, DOI:10.32604/cmc.2024.055049 - 15 October 2024

    Abstract Vision-based vehicle detection in adverse weather conditions such as fog, haze, and mist is a challenging research area in the fields of autonomous vehicles, collision avoidance, and Internet of Things (IoT)-enabled edge/fog computing traffic surveillance and monitoring systems. Efficient and cost-effective vehicle detection at high accuracy and speed in foggy weather is essential to avoiding road traffic collisions in real-time. To evaluate vision-based vehicle detection performance in foggy weather conditions, state-of-the-art Vehicle Detection in Adverse Weather Nature (DAWN) and Foggy Driving (FD) datasets are self-annotated using the YOLO LABEL tool and customized to four vehicle… More >

  • Open Access

    REVIEW

    Accounting for Quadratic and Cubic Invariants in Continuum Mechanics–An Overview

    Artur V. Dmitrenko1,2,*, Vladislav M. Ovsyannikov2

    FDMP-Fluid Dynamics & Materials Processing, Vol.20, No.9, pp. 1925-1939, 2024, DOI:10.32604/fdmp.2024.048389 - 23 August 2024

    Abstract The differential equations of continuum mechanics are the basis of an uncountable variety of phenomena and technological processes in fluid-dynamics and related fields. These equations contain derivatives of the first order with respect to time. The derivation of the equations of continuum mechanics uses the limit transitions of the tendency of the volume increment and the time increment to zero. Derivatives are used to derive the wave equation. The differential wave equation is second order in time. Therefore, increments of volume and increments of time in continuum mechanics should be considered as small but finite More >

  • Open Access

    VIEWPOINT

    Non-canonical BRAF variants and rearrangements in hairy cell leukemia

    STEPHEN E. LANGABEER*

    Oncology Research, Vol.32, No.9, pp. 1423-1427, 2024, DOI:10.32604/or.2024.051218 - 23 August 2024

    Abstract Hairy cell leukemia (HCL) is an uncommon mature B-cell malignancy characterized by a typical morphology, immunophenotype, and clinical profile. The vast majority of HCL patients harbor the canonical BRAF V600E mutation which has become a rationalized target of the subsequently deregulated RAS-RAF-MEK-MAPK signaling pathway in HCL patients who have relapsed or who are refractory to front-line therapy. However, several HCL patients with a classical phenotype display non-canonical BRAF mutations or rearrangements. These include sequence variants within alternative exons and an oncogenic fusion with the IGH gene. Care must be taken in the molecular diagnostic work-up of patients More >

  • Open Access

    ARTICLE

    Vaccinia-related kinase 2 variants differentially affect breast cancer growth by regulating kinase activity

    SEUNG-HEE GWAK1, JUHYUN LEE1, EUNJI OH1, DOHYUN LEE1,2, WONSHIK HAN3, JONGMIN KIM1,*, KYONG-TAI KIM4,*

    Oncology Research, Vol.32, No.2, pp. 421-432, 2024, DOI:10.32604/or.2023.031031 - 28 December 2023

    Abstract Genetic information is transcribed from genomic DNA to mRNA, which is then translated into three-dimensional proteins. mRNAs can undergo various post-transcriptional modifications, including RNA editing that alters mRNA sequences, ultimately affecting protein function. In this study, RNA editing was identified at the 499th base (c.499) of human vaccinia-related kinase 2 (VRK2). This RNA editing changes the amino acid in the catalytic domain of VRK2 from isoleucine (with adenine base) to valine (with guanine base). Isoleucine-containing VRK2 has higher kinase activity than the valine-containing VRK2, which leads to an increase in tumor cell proliferation. Earlier we… More > Graphic Abstract

    Vaccinia-related kinase 2 variants differentially affect breast cancer growth by regulating kinase activity

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