Open Access

ARTICLE

A Novel Deep Learning-Based Model for Classification of Wheat Gene Expression

Amr Ismail¹, Walid Hamdy^1,2, Aya M. Al-Zoghby³, Wael A. Awad³, Ahmed Ismail Ebada³, Yunyoung Nam⁴, Byeong-Gwon Kang^4,*, Mohamed Abouhawwash^5,6

1 Faculty of Science, Port Said University, Port Said, Egypt
2 Modern Academy for Computer Science and Management Technology, Cairo, 11742, Egypt
3 Faculty of Computers and Artificial Intelligence, Damietta University, New Damietta, Egypt
4 Department of ICT Convergence, Soonchunhyang University, Asan, 31538, South Korea
5 Department of Mathematics, Faculty of Science, Mansoura University, Mansoura, 35516, Egypt
6 Department of Computational Mathematics, Science, and Engineering (CMSE), Michigan State University, East Lansing, MI, 48824, USA

* Corresponding Author: Byeong-Gwon Kang. Email:

Computer Systems Science and Engineering 2024, 48(2), 273-285. https://doi.org/10.32604/csse.2023.038192

Received 01 December 2022; Accepted 02 February 2023; Issue published 19 March 2024

Abstract

Deep learning (DL) plays a critical role in processing and converting data into knowledge and decisions. DL technologies have been applied in a variety of applications, including image, video, and genome sequence analysis. In deep learning the most widely utilized architecture is Convolutional Neural Networks (CNN) are taught discriminatory traits in a supervised environment. In comparison to other classic neural networks, CNN makes use of a limited number of artificial neurons, therefore it is ideal for the recognition and processing of wheat gene sequences. Wheat is an essential crop of cereals for people around the world. Wheat Genotypes identification has an impact on the possible development of many countries in the agricultural sector. In quantitative genetics prediction of genetic values is a central issue. Wheat is an allohexaploid (AABBDD) with three distinct genomes. The sizes of the wheat genome are quite large compared to many other kinds and the availability of a diversity of genetic knowledge and normal structure at breeding lines of wheat, Therefore, genome sequence approaches based on techniques of Artificial Intelligence (AI) are necessary. This paper focuses on using the Wheat genome sequence will assist wheat producers in making better use of their genetic resources and managing genetic variation in their breeding program, as well as propose a novel model based on deep learning for offering a fundamental overview of genomic prediction theory and current constraints. In this paper, the hyperparameters of the network are optimized in the CNN to decrease the requirement for manual search and enhance network performance using a new proposed model built on an optimization algorithm and Convolutional Neural Networks (CNN).

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