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ARTICLE

Minjie Liu^*, Na Gao, Yaqiong Zhao, Yingpeng Wu, Zongying Yuan
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2367-2382, 2022, DOI:10.32604/phyton.2022.021406
（This article belongs to this Special Issue: Plant Omics in Challenging Environment)
Abstract Lysin motif (LysM)-containing proteins (LYPs) are important pattern recognition receptors in plants. However, the evolutionary history and characteristics of LYP genes remain largely unclear in wheat. In this study, 62 LYPs were identified at genome wide in wheat. Based on phylogenetic and domain analysis, wheat LYPs were classified into 6 subgroups (group LysMe, LysMn, LYP, LYK, LysMFbox). Syntenic analysis showed the evolution of LYP genes in wheat. RNA-seq data showed that 22 genes were not expressed at any tissue or stress stimulation period. Some LYP and LYK genes were tissue- or stage- specific. The majority of TaLYK5s, TaLYK6s, TaLYP2s and… More >

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ARTICLE

Elizabeth Carrillo-Flores¹, Jonanci Arreola-Rivera¹, Denní Mariana Pazos-Solís², Moisés Bocanegra-Mondragón², Grisel Fierro-Romero³, Ma. Elena Mellado-Rojas¹, Elda Beltrán-Peña^1,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2383-2401, 2022, DOI:10.32604/phyton.2022.021507
（This article belongs to this Special Issue: Integrating Agronomy and Plant Physiology for Improving Crop Production)
Abstract The potential of Plant Growth Promoting Rhizobacteria (PGPR) has been demonstrated in the case of plant inoculation with bacteria of the genus Azospirillum which improves yield. A. brasilense produces a wide variety of molecules, including the natural auxin indole-3-acetic acid (IAA), as well as other phytoregulators. However, several studies have suggested that auxin induces changes in plant development during their interaction with the bacteria. The effects of A. brasilense Sp245 on the development of Arabidopsis thaliana root were investigated to help explain the molecular basis of the interaction. The results obtained showed a decrease in primary root length from the… More >

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ARTICLE

Ting Zhang^1,2, Ping Li^3,*, Jiali Wei^3,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2403-2417, 2022, DOI:10.32604/phyton.2022.022421
（This article belongs to this Special Issue: Plant–Environment Interactions)
Abstract Hedera helix is an evergreen ornamental plant that is resistant to cool but not high temperature and deserves to be further researched for improving its adaptability to heat stress. Two Hedera helix cultivars, heat-tolerant (HT) ‘Jessica’ and heat-sensitive (HS) ‘Shamrock’, were used for differences analyses of transcriptome. We detected 6179 differentially expressed genes (DEGs) and 5992 DEGs in ‘Jessica’ and ‘Shamrock’ to heat stress, respectively. Among these, 1983 upregulated DEGs and 1400 downregulated DEGs were shared between both varieties, resulting in enhancement of various pathways such as biosynthesis of secondary metabolites, glyoxylate dicarboxylate metabolism, and protein processing in endoplasmic reticulum… More >

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ARTICLE

Xiaofang Zeng^1,#, Guangzheng Li^1,#, Nu’an Liu², Yan Li¹, Jianrong Li¹, Xiaozhen Huang¹, Degang Zhao^1,2,,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2419-2437, 2022, DOI:10.32604/phyton.2022.021199
（This article belongs to this Special Issue: High-Yield Rice Physiology & Genetics)
Abstract Leaf-color mutants play an important role in the study of chlorophyll metabolism, chloroplast development, and photosynthesis system. In this study, the yellow leaf 1 (yl1) rice mutant was identified from the ethyl methane sulfonate-treated mutant progeny of Lailong, a glutinous japonica rice landrace cultivated in Guizhou Province, China. Results showed that yl1 exhibited yellow leaves with decreased chlorophyll content throughout the growth period. Chloroplast development in the yl1 mutant was disrupted, and the grana lamellae was loosely packed and disordered. RNA sequencing and real-time quantitative polymerase chain reaction (qRT-PCR) analysis revealed that the chlorophyll synthesis-related genes OsCHLH, OsCHLM, OsCHLG, PORB,… More >

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ARTICLE

Rohini Bhat^1,*, Anil Kumar Singh², Muntazir Mushtaq³, Romesh Kumar Salgotra², Manmohan Sharma², Basharat Ahmad Bhat⁴, Umer Basu⁵, Ibrahim Al-Ashkar ⁶, Mohammad Anwar Hossain^7,*, Akihiro Ueda⁸, Ayman El Sabagh⁹
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2439-2459, 2022, DOI:10.32604/phyton.2022.020100
（This article belongs to this Special Issue: High-Yield Rice Physiology & Genetics)
Abstract Identification of quantitative trait loci (QTLs) controlling yield and yield-related traits in rice was performed in the F₂ mapping population derived from parental rice genotypes DHMAS and K343. A total of 30 QTLs governing nine different traits were identified using the composite interval mapping (CIM) method. Four QTLs were mapped for number of tillers per plant on chromosomes 1 (2 QTLs), 2 and 3; three QTLs for panicle number per plant on chromosomes 1 (2 QTLs) and 3; four QTLs for plant height on chromosomes 2, 4, 5 and 6; one QTL for spikelet density on chromosome 5; four QTLs… More >

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ARTICLE

Rujian Lan^1,2,3,#, Meiyang Duan^1,2,3,#, Feida Wu^1,2,3,#, Rifang Lai^1,2,3, Zhaowen Mo^1,2,3, Shenggang Pan^1,2,3, Xiangru Tang^1,2,3,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2461-2473, 2022, DOI:10.32604/phyton.2022.021884
（This article belongs to this Special Issue: High-Yield Rice Physiology & Genetics)
Abstract Fragrant rice is popular for the good grain quality and special aroma. The present study conducted a field experiment to investigate the effects of ultrasonic seed treatment on grain yield, quality characters, physiological properties and aroma biosynthesis of different fragrant rice genotypes. The seeds of three fragrant rice genotypes were exposed to 1 min of ultrasonic vibration and then cultivated in paddy field. The results of present study showed that ultrasonic seed treatment increased grain yield of all fragrant rice genotypes but the responses of yield formation to ultrasonic were varied with different genotypes. Compared with control, ultrasonic seed treatment increased… More >

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ARTICLE

Shuang Song¹, Xiaomei Li², Xin Wang¹, Qi Zhou¹, Yongping Li¹, Xiaojing Wang¹, Shoukun Dong^1,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2475-2490, 2022, DOI:10.32604/phyton.2022.021090
Abstract Soybean is an important legume food crop, and its seeds are rich in nutrients, providing humans and animals with edible oil and protein feed. However, soybean is sensitive to water requirements, and drought is an important factor limiting soybean yield and quality. This study used Heinong 84 (drought resistant variety) and Hefeng 46 (intermediate variety) as tested varieties planted in chernozem, albic, and black soils. The effects of drought stress on the activities of key enzymes in carbon metabolism and photosynthetic characteristics of soybean were studied during the flowering stage, most sensitive to water. (1) The activities of SS-1, 6PGDH,… More >

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ARTICLE

Tauqeer Ahmad Yasir¹, Sobia Aslam¹, Muhammad Shahid Rizwan², Allah Wasaya^1,*, Muhammad Ateeq¹, Muhammad Naeem Khan³, Sikander Khan Tanveer⁴, Walid Soufan⁵, Basharat Ali⁶, Allah Ditta^7,8, Arpna Kumari⁹, Ayman EL Sabagh^10,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2491-2504, 2022, DOI:10.32604/phyton.2022.022473
（This article belongs to this Special Issue: The Effect of Soil Quality Degradation on the Plant Growth, Quality and Food Safety in Subtropical Agroforestry Ecosystems)
Abstract In soil biota, higher and enduring concentration of heavy metals like cadmium (Cd) is hazardous and associated with great loss in growth, yield, and quality parameters of most of the crop plants. Recently, in-situ applications of eco-friendly stabilizing agents in the form of organic modifications have been utilized to mitigate the adverse effects of Cd-toxicity. This controlled experiment was laid down to appraise the imprints of various applied organic amendments namely poultry manure (PM), farmyard manure (FYM), and sugarcane press mud (PS) to immobilize Cd in polluted soil. Moreover, phytoavailability of Cd in wheat was also accessed under an alkaline… More >

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ARTICLE

Yanzhao Zhang^*, Chenyang Yu, Xi Lu, Yanwei Cheng
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2505-2518, 2022, DOI:10.32604/phyton.2022.021455
Abstract Tree peony cultivars with yellow flowers are rare and valuable, but the molecular mechanism of pigment accumulation is not clear. In this study, the petal transcriptome of three developmental stages were sequenced to determine the differentially expressed genes (DEGs) regulating yellow flowers color. The results showed that 10,842 and 12,022 DEGs were screened in stage 1 vs. stage 2 and in stage 2 vs. stage 3, respectively. Through analysis of flavonoid structural genes (FSGs), we found that the transcription level of DFR was very low in the three developmental stages. In a small group of cultivars, the DFR transcription level… More >

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596

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ARTICLE

Han Lei^1,#, Junlin Li^2,#, Zhizhong Song^1,3,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2519-2536, 2022, DOI:10.32604/phyton.2022.021268
（This article belongs to this Special Issue: Plant Omics in Challenging Environment)
Abstract Potassium (K⁺) is an essential macronutrient for plants to maintain normal growth and development. Shaker-like K⁺ channels and HAK/KUP/KT transporters are critical components in the K⁺ acquisition and translocation. In this study, we identified 9 Shaker-like K⁺ channel (VvK) and 18 HAK/KUP/KT transporter (VvKUP) genes in grape, which were renamed according to their distributions in the genome and relative linear orders among the distinct chromosomes. Similar structure organizations were found within each group according to the exon/intron structure and protein motif analysis. Chromosomal distribution analysis showed that 9 VvK genes and 18 VvKUP genes were unevenly distributed on 7 or… More >

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ARTICLE

Qiang Ai, Cuijing Liu^*, Mei Han^*, Limin Yang
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2537-2548, 2022, DOI:10.32604/phyton.2022.021889
（This article belongs to this Special Issue: Plant Omics in Challenging Environment)
Abstract Iris domestica is a plant of the Iridaceae family and is drought-tolerant, but its drought-resistance mechanism is not yet clear. Analysing the gene expression changes of I. domestica by qRT-PCR is an important mean to understand its drought resistance characteristics. Nevertheless, a lack of reference genes greatly hinders investigation and research on the adaptation of I. domestica to drought at the molecular and genetic levels. In this study, we assessed the expression stability of 11 candidate gene in I. domestica under drought stress conditions and different tissues using geNorm, NormFinder, BestKeeper and RefFinder tools. The results showed that EF1β was… More >

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COMMUNICATION

Zhiguo Lu¹, Yuhong Zheng^1,*, Pengchong Zhang², Boyuan Fan³, Aimin Yu⁴, Li Fu^3,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2549-2558, 2022, DOI:10.32604/phyton.2022.021288
（This article belongs to this Special Issue: Chemosensors in Phytochemistry and Species Identification)
Abstract In this communication, we used electrochemical sensor for recording the electrochemical profiles of eleven species of Yulania spp. from leaf extract. Two solvents and two buffer conditions were used for electrochemical fingerprints collection. Their electrochemical fingerprints can be converted to different patterns and consequently for species recognition. The results indicate the pattern recognition is much convenient than that of the recognition of species directly using voltammetric signal. The current information in electrochemical fingerprinting represents the type and amount of electrochemically active molecules, which linked to the genetic differences among the plants. Therefore, the electrochemical fingerprints were applied for further phylogenetic… More >

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508

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Shuai Wang, Zhihong Yu^*, Wenjie Zhang, Dongxu Zhao, Aorigele
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2559-2582, 2022, DOI:10.32604/phyton.2022.021354
Abstract

Sunflower (Helianthus annuus L.) is one of the four major oil crops in the world and has high economic value. However, the lack of discrete element method (DEM) models and parameters for sunflower seeds hinders the application of DEM for computer simulation in the key working processes of sunflower seed sowing and harvesting. The present study was conducted on two varieties of sunflower, and the DEM model of sunflower seeds was established by using 3D scanning technology based on the distribution of triaxial dimensions and volumes of the geometric model of sunflower seeds. Similarly, the physical characteristics parameters of sunflower… More >

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474

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Gyung Deok Han¹, Dae Ho Jung², Seong Heo^3,*, Yong Suk Chung^1,*
Phyton-International Journal of Experimental Botany, Vol.91, No.11, pp. 2583-2590, 2022, DOI:10.32604/phyton.2022.022866
Abstract In the smart farm, we can control every detail for production. Collecting every factor that affects the crop’s final yield is necessary to optimize its efficiency. The SPAD values were observed in the ‘Star’ cultivar blueberry (Vaccinium darrowii) three times a day and at three different plant heights. The pattern of SPAD value change was different by the planting position. Ground planted blueberry (V. darrowii) represented a stable SPAD value during the day and at the different heights. However, the SPAD value was increased by time in pot-planted blueberry (V. darrowii). Also, the SPAD value of pot-planted blueberry was lower… More >

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